Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KLHL41O60662 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
KLHL41O60662 AL391256.1-201ENST00000443260 1855 ntBASIC16.67■□□□□ 0.26
KLHL41O60662 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
KLHL41O60662 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.67■□□□□ 0.26
KLHL41O60662 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
KLHL41O60662 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KLHL41O60662 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
KLHL41O60662 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
KLHL41O60662 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KLHL41O60662 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.67■□□□□ 0.26
KLHL41O60662 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.67■□□□□ 0.26
KLHL41O60662 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KLHL41O60662 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.67■□□□□ 0.26
KLHL41O60662 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
KLHL41O60662 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
KLHL41O60662 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.67■□□□□ 0.26
KLHL41O60662 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
KLHL41O60662 AC091607.1-201ENST00000490318 1060 ntBASIC16.67■□□□□ 0.26
KLHL41O60662 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.67■□□□□ 0.26
KLHL41O60662 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.67■□□□□ 0.26
KLHL41O60662 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.67■□□□□ 0.26
KLHL41O60662 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KLHL41O60662 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.67■□□□□ 0.26
KLHL41O60662 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.67■□□□□ 0.26
KLHL41O60662 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.67■□□□□ 0.26
KLHL41O60662 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
KLHL41O60662 AL645728.1-201ENST00000366221 2101 ntBASIC16.67■□□□□ 0.26
KLHL41O60662 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KLHL41O60662 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
KLHL41O60662 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KLHL41O60662 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
KLHL41O60662 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.67■□□□□ 0.26
KLHL41O60662 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
KLHL41O60662 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
KLHL41O60662 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
KLHL41O60662 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
KLHL41O60662 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KLHL41O60662 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
KLHL41O60662 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KLHL41O60662 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
KLHL41O60662 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.66■□□□□ 0.26
KLHL41O60662 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
KLHL41O60662 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
KLHL41O60662 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
KLHL41O60662 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.66■□□□□ 0.26
KLHL41O60662 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.66■□□□□ 0.26
KLHL41O60662 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
KLHL41O60662 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KLHL41O60662 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KLHL41O60662 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
KLHL41O60662 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KLHL41O60662 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KLHL41O60662 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KLHL41O60662 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
KLHL41O60662 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KLHL41O60662 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KLHL41O60662 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.66■□□□□ 0.26
KLHL41O60662 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
KLHL41O60662 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KLHL41O60662 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.66■□□□□ 0.26
KLHL41O60662 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
KLHL41O60662 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
KLHL41O60662 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KLHL41O60662 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KLHL41O60662 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KLHL41O60662 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
KLHL41O60662 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
KLHL41O60662 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KLHL41O60662 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
KLHL41O60662 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.66■□□□□ 0.26
KLHL41O60662 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
KLHL41O60662 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.65■□□□□ 0.26
KLHL41O60662 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
KLHL41O60662 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.65■□□□□ 0.26
KLHL41O60662 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.65■□□□□ 0.26
KLHL41O60662 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KLHL41O60662 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.65■□□□□ 0.26
KLHL41O60662 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
KLHL41O60662 AL049757.1-201ENST00000616842 1596 ntBASIC16.65■□□□□ 0.26
KLHL41O60662 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KLHL41O60662 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KLHL41O60662 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
KLHL41O60662 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.65■□□□□ 0.26
KLHL41O60662 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.65■□□□□ 0.26
KLHL41O60662 KRT18P58-201ENST00000527480 1120 ntBASIC16.65■□□□□ 0.26
KLHL41O60662 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
KLHL41O60662 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.65■□□□□ 0.26
KLHL41O60662 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.65■□□□□ 0.26
KLHL41O60662 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
KLHL41O60662 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.65■□□□□ 0.26
KLHL41O60662 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.65■□□□□ 0.26
KLHL41O60662 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.65■□□□□ 0.26
KLHL41O60662 AC006538.3-201ENST00000612495 578 ntBASIC16.65■□□□□ 0.26
KLHL41O60662 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
KLHL41O60662 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
KLHL41O60662 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.65■□□□□ 0.26
KLHL41O60662 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.65■□□□□ 0.26
KLHL41O60662 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
KLHL41O60662 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms