Protein–RNA interactions for Protein: O60504

SORBS3, Vinexin, humanhuman

Predictions only

Length 671 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3O60504 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SORBS3O60504 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
SORBS3O60504 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SORBS3O60504 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SORBS3O60504 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SORBS3O60504 OR6D1P-203ENST00000641209 4860 ntBASIC18.79■□□□□ 0.6
SORBS3O60504 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.79■□□□□ 0.6
SORBS3O60504 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SORBS3O60504 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SORBS3O60504 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SORBS3O60504 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SORBS3O60504 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.78■□□□□ 0.6
SORBS3O60504 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SORBS3O60504 AL645608.8-201ENST00000606034 2086 ntBASIC18.78■□□□□ 0.6
SORBS3O60504 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SORBS3O60504 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SORBS3O60504 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SORBS3O60504 TUBB3P1-201ENST00000405796 1332 ntBASIC18.78■□□□□ 0.6
SORBS3O60504 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SORBS3O60504 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SORBS3O60504 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SORBS3O60504 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.78■□□□□ 0.6
SORBS3O60504 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SORBS3O60504 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SORBS3O60504 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SORBS3O60504 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SORBS3O60504 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.78■□□□□ 0.6
SORBS3O60504 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SORBS3O60504 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.78■□□□□ 0.6
SORBS3O60504 PMS2P4-201ENST00000412466 1052 ntBASIC18.78■□□□□ 0.6
SORBS3O60504 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
SORBS3O60504 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.78■□□□□ 0.6
SORBS3O60504 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
SORBS3O60504 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SORBS3O60504 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SORBS3O60504 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SORBS3O60504 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SORBS3O60504 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SORBS3O60504 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SORBS3O60504 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SORBS3O60504 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.78■□□□□ 0.6
SORBS3O60504 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.78■□□□□ 0.6
SORBS3O60504 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SORBS3O60504 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SORBS3O60504 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SORBS3O60504 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.78■□□□□ 0.6
SORBS3O60504 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SORBS3O60504 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.77■□□□□ 0.6
SORBS3O60504 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SORBS3O60504 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SORBS3O60504 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SORBS3O60504 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.77■□□□□ 0.6
SORBS3O60504 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.77■□□□□ 0.6
SORBS3O60504 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SORBS3O60504 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
SORBS3O60504 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SORBS3O60504 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.77■□□□□ 0.6
SORBS3O60504 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.77■□□□□ 0.6
SORBS3O60504 MIR943-201ENST00000401286 94 ntBASIC18.77■□□□□ 0.6
SORBS3O60504 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SORBS3O60504 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SORBS3O60504 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.77■□□□□ 0.6
SORBS3O60504 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.77■□□□□ 0.6
SORBS3O60504 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.77■□□□□ 0.6
SORBS3O60504 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.77■□□□□ 0.6
SORBS3O60504 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.77■□□□□ 0.6
SORBS3O60504 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.77■□□□□ 0.6
SORBS3O60504 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.77■□□□□ 0.6
SORBS3O60504 AP000842.3-202ENST00000569238 1080 ntBASIC18.77■□□□□ 0.6
SORBS3O60504 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.77■□□□□ 0.6
SORBS3O60504 MIR6080-201ENST00000617359 66 ntBASIC18.77■□□□□ 0.6
SORBS3O60504 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SORBS3O60504 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SORBS3O60504 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
SORBS3O60504 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
SORBS3O60504 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SORBS3O60504 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SORBS3O60504 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SORBS3O60504 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SORBS3O60504 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SORBS3O60504 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SORBS3O60504 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SORBS3O60504 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
SORBS3O60504 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SORBS3O60504 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SORBS3O60504 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.76■□□□□ 0.59
SORBS3O60504 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SORBS3O60504 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SORBS3O60504 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SORBS3O60504 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SORBS3O60504 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SORBS3O60504 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SORBS3O60504 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SORBS3O60504 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SORBS3O60504 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SORBS3O60504 LINC00895-201ENST00000629028 1637 ntBASIC18.76■□□□□ 0.59
SORBS3O60504 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.76■□□□□ 0.59
SORBS3O60504 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.76■□□□□ 0.59
SORBS3O60504 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.76■□□□□ 0.59
SORBS3O60504 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms