Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAF3IP2O43734 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 GGT4P-201ENST00000623672 1708 ntBASIC14.89□□□□□ -0.03
TRAF3IP2O43734 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.89□□□□□ -0.03
TRAF3IP2O43734 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 HMGA1P7-201ENST00000406908 502 ntBASIC14.89□□□□□ -0.03
TRAF3IP2O43734 AC007967.2-201ENST00000432613 625 ntBASIC14.89□□□□□ -0.03
TRAF3IP2O43734 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 AL513480.1-201ENST00000451731 511 ntBASIC14.89□□□□□ -0.03
TRAF3IP2O43734 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.89□□□□□ -0.03
TRAF3IP2O43734 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 AL645728.2-201ENST00000641974 660 ntBASIC14.89□□□□□ -0.03
TRAF3IP2O43734 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 GGT3P-204ENST00000453783 1664 ntBASIC14.89□□□□□ -0.03
TRAF3IP2O43734 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 AL031731.1-201ENST00000642131 2094 ntBASIC14.89□□□□□ -0.03
TRAF3IP2O43734 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 AC124067.4-201ENST00000519691 2379 ntBASIC14.89□□□□□ -0.03
TRAF3IP2O43734 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAF3IP2O43734 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.88□□□□□ -0.03
TRAF3IP2O43734 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TRAF3IP2O43734 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAF3IP2O43734 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms