Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KDELR3O43731 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
KDELR3O43731 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.92■□□□□ 0.3
KDELR3O43731 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.92■□□□□ 0.3
KDELR3O43731 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
KDELR3O43731 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KDELR3O43731 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
KDELR3O43731 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.92■□□□□ 0.3
KDELR3O43731 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KDELR3O43731 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.92■□□□□ 0.3
KDELR3O43731 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.92■□□□□ 0.3
KDELR3O43731 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KDELR3O43731 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.92■□□□□ 0.3
KDELR3O43731 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
KDELR3O43731 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
KDELR3O43731 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
KDELR3O43731 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KDELR3O43731 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.91■□□□□ 0.3
KDELR3O43731 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KDELR3O43731 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.91■□□□□ 0.3
KDELR3O43731 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KDELR3O43731 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
KDELR3O43731 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
KDELR3O43731 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
KDELR3O43731 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
KDELR3O43731 UBALD1-205ENST00000590891 2641 ntBASIC16.91■□□□□ 0.3
KDELR3O43731 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KDELR3O43731 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KDELR3O43731 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
KDELR3O43731 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
KDELR3O43731 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KDELR3O43731 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KDELR3O43731 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KDELR3O43731 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KDELR3O43731 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.91■□□□□ 0.3
KDELR3O43731 AP006288.1-201ENST00000446065 395 ntBASIC16.91■□□□□ 0.3
KDELR3O43731 RN7SL589P-201ENST00000481268 310 ntBASIC16.91■□□□□ 0.3
KDELR3O43731 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.91■□□□□ 0.3
KDELR3O43731 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.91■□□□□ 0.3
KDELR3O43731 AC243562.1-201ENST00000560672 389 ntBASIC16.91■□□□□ 0.3
KDELR3O43731 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.91■□□□□ 0.3
KDELR3O43731 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.91■□□□□ 0.3
KDELR3O43731 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.91■□□□□ 0.3
KDELR3O43731 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.91■□□□□ 0.3
KDELR3O43731 AL691403.2-201ENST00000618460 490 ntBASIC16.91■□□□□ 0.3
KDELR3O43731 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
KDELR3O43731 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KDELR3O43731 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
KDELR3O43731 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.91■□□□□ 0.3
KDELR3O43731 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KDELR3O43731 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KDELR3O43731 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KDELR3O43731 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.91■□□□□ 0.3
KDELR3O43731 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.91■□□□□ 0.3
KDELR3O43731 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KDELR3O43731 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
KDELR3O43731 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.91■□□□□ 0.3
KDELR3O43731 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.91■□□□□ 0.3
KDELR3O43731 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
KDELR3O43731 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR3O43731 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR3O43731 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR3O43731 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR3O43731 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR3O43731 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR3O43731 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.9■□□□□ 0.3
KDELR3O43731 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR3O43731 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR3O43731 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR3O43731 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR3O43731 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR3O43731 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.9■□□□□ 0.3
KDELR3O43731 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR3O43731 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR3O43731 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.9■□□□□ 0.3
KDELR3O43731 TIMM8BP1-201ENST00000452384 211 ntBASIC16.9■□□□□ 0.3
KDELR3O43731 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.9■□□□□ 0.3
KDELR3O43731 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR3O43731 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.9■□□□□ 0.3
KDELR3O43731 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.9■□□□□ 0.3
KDELR3O43731 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.9■□□□□ 0.3
KDELR3O43731 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.9■□□□□ 0.3
KDELR3O43731 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.9■□□□□ 0.3
KDELR3O43731 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR3O43731 GGT3P-204ENST00000453783 1664 ntBASIC16.9■□□□□ 0.3
KDELR3O43731 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
KDELR3O43731 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
KDELR3O43731 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
KDELR3O43731 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.9■□□□□ 0.3
KDELR3O43731 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.9■□□□□ 0.3
KDELR3O43731 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KDELR3O43731 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.3
KDELR3O43731 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
KDELR3O43731 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.89■□□□□ 0.29
KDELR3O43731 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KDELR3O43731 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.89■□□□□ 0.29
KDELR3O43731 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
KDELR3O43731 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KDELR3O43731 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KDELR3O43731 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms