Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RTL8CO15255 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RTL8CO15255 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
RTL8CO15255 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RTL8CO15255 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RTL8CO15255 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
RTL8CO15255 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RTL8CO15255 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
RTL8CO15255 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
RTL8CO15255 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC11.09□□□□□ -0.63
RTL8CO15255 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC11.09□□□□□ -0.63
RTL8CO15255 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC11.09□□□□□ -0.63
RTL8CO15255 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RTL8CO15255 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RTL8CO15255 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RTL8CO15255 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RTL8CO15255 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RTL8CO15255 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RTL8CO15255 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
RTL8CO15255 PGF-202ENST00000405431 666 ntTSL 5 BASIC11.09□□□□□ -0.63
RTL8CO15255 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RTL8CO15255 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC11.09□□□□□ -0.63
RTL8CO15255 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC11.09□□□□□ -0.63
RTL8CO15255 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC11.09□□□□□ -0.63
RTL8CO15255 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RTL8CO15255 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC11.09□□□□□ -0.63
RTL8CO15255 AC140912.1-201ENST00000577171 1054 ntBASIC11.09□□□□□ -0.63
RTL8CO15255 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC11.09□□□□□ -0.63
RTL8CO15255 AC073389.1-201ENST00000595595 795 ntBASIC11.09□□□□□ -0.63
RTL8CO15255 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RTL8CO15255 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RTL8CO15255 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RTL8CO15255 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
RTL8CO15255 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RTL8CO15255 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
RTL8CO15255 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
RTL8CO15255 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
RTL8CO15255 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
RTL8CO15255 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RTL8CO15255 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC11.09□□□□□ -0.63
RTL8CO15255 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
RTL8CO15255 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC11.09□□□□□ -0.63
RTL8CO15255 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RTL8CO15255 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
RTL8CO15255 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
RTL8CO15255 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
RTL8CO15255 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
RTL8CO15255 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
RTL8CO15255 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
RTL8CO15255 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.63
RTL8CO15255 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RTL8CO15255 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
RTL8CO15255 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC11.08□□□□□ -0.64
RTL8CO15255 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RTL8CO15255 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC11.08□□□□□ -0.64
RTL8CO15255 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC11.08□□□□□ -0.64
RTL8CO15255 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC11.08□□□□□ -0.64
RTL8CO15255 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
RTL8CO15255 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
RTL8CO15255 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RTL8CO15255 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RTL8CO15255 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC11.08□□□□□ -0.64
RTL8CO15255 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC11.08□□□□□ -0.64
RTL8CO15255 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RTL8CO15255 AC098614.1-201ENST00000368528 745 ntBASIC11.08□□□□□ -0.64
RTL8CO15255 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RTL8CO15255 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RTL8CO15255 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RTL8CO15255 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RTL8CO15255 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC11.08□□□□□ -0.64
RTL8CO15255 PP14571-201ENST00000404327 934 ntTSL 2 BASIC11.08□□□□□ -0.64
RTL8CO15255 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
RTL8CO15255 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC11.08□□□□□ -0.64
RTL8CO15255 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC11.08□□□□□ -0.64
RTL8CO15255 AL353779.1-201ENST00000434793 351 ntBASIC11.08□□□□□ -0.64
RTL8CO15255 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RTL8CO15255 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC11.08□□□□□ -0.64
RTL8CO15255 GIMAP3P-201ENST00000495150 836 ntBASIC11.08□□□□□ -0.64
RTL8CO15255 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC11.08□□□□□ -0.64
RTL8CO15255 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC11.08□□□□□ -0.64
RTL8CO15255 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC11.08□□□□□ -0.64
RTL8CO15255 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RTL8CO15255 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
RTL8CO15255 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RTL8CO15255 AL844908.2-201ENST00000609461 460 ntBASIC11.08□□□□□ -0.64
RTL8CO15255 TEX28P1-201ENST00000613479 1221 ntBASIC11.08□□□□□ -0.64
RTL8CO15255 TEX28P2-201ENST00000617764 1221 ntBASIC11.08□□□□□ -0.64
RTL8CO15255 MIR6799-201ENST00000620297 69 ntBASIC11.08□□□□□ -0.64
RTL8CO15255 IGHV3-72-202ENST00000621503 303 ntBASIC11.08□□□□□ -0.64
RTL8CO15255 RAB34-223ENST00000636154 730 ntTSL 2 BASIC11.08□□□□□ -0.64
RTL8CO15255 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
RTL8CO15255 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RTL8CO15255 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC11.08□□□□□ -0.64
RTL8CO15255 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC11.08□□□□□ -0.64
RTL8CO15255 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RTL8CO15255 AC131009.4-201ENST00000624048 1740 ntBASIC11.08□□□□□ -0.64
RTL8CO15255 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC11.08□□□□□ -0.64
RTL8CO15255 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RTL8CO15255 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
RTL8CO15255 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms