Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
NDUFA1O15239 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NDUFA1O15239 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NDUFA1O15239 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NDUFA1O15239 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NDUFA1O15239 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
NDUFA1O15239 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
NDUFA1O15239 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
NDUFA1O15239 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
NDUFA1O15239 AC010460.3-201ENST00000511359 1579 ntBASIC11.5□□□□□ -0.57
NDUFA1O15239 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
NDUFA1O15239 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
NDUFA1O15239 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NDUFA1O15239 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
NDUFA1O15239 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC11.49□□□□□ -0.57
NDUFA1O15239 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NDUFA1O15239 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC11.49□□□□□ -0.57
NDUFA1O15239 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
NDUFA1O15239 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
NDUFA1O15239 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
NDUFA1O15239 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NDUFA1O15239 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NDUFA1O15239 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
NDUFA1O15239 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC11.49□□□□□ -0.57
NDUFA1O15239 AMT-206ENST00000458307 1860 ntTSL 2 BASIC11.49□□□□□ -0.57
NDUFA1O15239 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NDUFA1O15239 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NDUFA1O15239 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC11.49□□□□□ -0.57
NDUFA1O15239 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC11.49□□□□□ -0.57
NDUFA1O15239 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
NDUFA1O15239 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NDUFA1O15239 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
NDUFA1O15239 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
NDUFA1O15239 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NDUFA1O15239 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC11.49□□□□□ -0.57
NDUFA1O15239 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC11.49□□□□□ -0.57
NDUFA1O15239 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC11.49□□□□□ -0.57
NDUFA1O15239 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC11.49□□□□□ -0.57
NDUFA1O15239 VENTXP7-201ENST00000475503 772 ntBASIC11.49□□□□□ -0.57
NDUFA1O15239 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC11.49□□□□□ -0.57
NDUFA1O15239 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
NDUFA1O15239 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
NDUFA1O15239 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC11.49□□□□□ -0.57
NDUFA1O15239 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC11.49□□□□□ -0.57
NDUFA1O15239 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC11.49□□□□□ -0.57
NDUFA1O15239 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC11.49□□□□□ -0.57
NDUFA1O15239 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC11.49□□□□□ -0.57
NDUFA1O15239 LINC01023-201ENST00000606054 436 ntBASIC11.49□□□□□ -0.57
NDUFA1O15239 WDR6-223ENST00000627177 207 ntTSL 2 BASIC11.49□□□□□ -0.57
NDUFA1O15239 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
NDUFA1O15239 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
NDUFA1O15239 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
NDUFA1O15239 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC11.49□□□□□ -0.57
NDUFA1O15239 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
NDUFA1O15239 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC11.49□□□□□ -0.57
NDUFA1O15239 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NDUFA1O15239 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NDUFA1O15239 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
NDUFA1O15239 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NDUFA1O15239 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
NDUFA1O15239 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
NDUFA1O15239 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
NDUFA1O15239 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
NDUFA1O15239 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
NDUFA1O15239 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NDUFA1O15239 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC11.49□□□□□ -0.57
NDUFA1O15239 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
NDUFA1O15239 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
NDUFA1O15239 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC11.49□□□□□ -0.57
NDUFA1O15239 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
NDUFA1O15239 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA1O15239 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
NDUFA1O15239 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
NDUFA1O15239 HLA-DQB2-231ENST00000435145 2026 ntBASIC11.48□□□□□ -0.57
NDUFA1O15239 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC11.48□□□□□ -0.57
NDUFA1O15239 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA1O15239 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC11.48□□□□□ -0.57
NDUFA1O15239 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC11.48□□□□□ -0.57
NDUFA1O15239 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA1O15239 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA1O15239 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
NDUFA1O15239 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA1O15239 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA1O15239 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC11.48□□□□□ -0.57
NDUFA1O15239 DBET-201ENST00000630918 3363 ntBASIC11.48□□□□□ -0.57
NDUFA1O15239 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA1O15239 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA1O15239 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
NDUFA1O15239 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC11.48□□□□□ -0.57
NDUFA1O15239 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA1O15239 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC11.48□□□□□ -0.57
NDUFA1O15239 AL645929.1-201ENST00000420084 975 ntBASIC11.48□□□□□ -0.57
NDUFA1O15239 AC007967.3-201ENST00000434308 558 ntBASIC11.48□□□□□ -0.57
NDUFA1O15239 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC11.48□□□□□ -0.57
NDUFA1O15239 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NDUFA1O15239 AC122714.2-201ENST00000502787 707 ntBASIC11.48□□□□□ -0.57
NDUFA1O15239 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC11.48□□□□□ -0.57
NDUFA1O15239 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC11.48□□□□□ -0.57
NDUFA1O15239 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC11.48□□□□□ -0.57
NDUFA1O15239 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms