Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.56■□□□□ 0.4
SOX1O00570 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.56■□□□□ 0.4
SOX1O00570 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SOX1O00570 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.56■□□□□ 0.4
SOX1O00570 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
SOX1O00570 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.56■□□□□ 0.4
SOX1O00570 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
SOX1O00570 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SOX1O00570 RNF165-205ENST00000588679 2904 ntBASIC17.56■□□□□ 0.4
SOX1O00570 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.56■□□□□ 0.4
SOX1O00570 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.56■□□□□ 0.4
SOX1O00570 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
SOX1O00570 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SOX1O00570 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.56■□□□□ 0.4
SOX1O00570 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
SOX1O00570 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SOX1O00570 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SOX1O00570 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.55■□□□□ 0.4
SOX1O00570 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.55■□□□□ 0.4
SOX1O00570 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SOX1O00570 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SOX1O00570 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SOX1O00570 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.55■□□□□ 0.4
SOX1O00570 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SOX1O00570 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SOX1O00570 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SOX1O00570 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.55■□□□□ 0.4
SOX1O00570 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SOX1O00570 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SOX1O00570 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC17.55■□□□□ 0.4
SOX1O00570 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SOX1O00570 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SOX1O00570 BX284668.4-201ENST00000453917 508 ntBASIC17.55■□□□□ 0.4
SOX1O00570 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SOX1O00570 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC17.55■□□□□ 0.4
SOX1O00570 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC17.55■□□□□ 0.4
SOX1O00570 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SOX1O00570 MIR6069-201ENST00000620069 79 ntBASIC17.55■□□□□ 0.4
SOX1O00570 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SOX1O00570 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
SOX1O00570 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SOX1O00570 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SOX1O00570 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SOX1O00570 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
SOX1O00570 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SOX1O00570 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SOX1O00570 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SOX1O00570 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SOX1O00570 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SOX1O00570 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SOX1O00570 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SOX1O00570 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SOX1O00570 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SOX1O00570 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SOX1O00570 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.54■□□□□ 0.4
SOX1O00570 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.54■□□□□ 0.4
SOX1O00570 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SOX1O00570 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SOX1O00570 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SOX1O00570 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.54■□□□□ 0.4
SOX1O00570 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.54■□□□□ 0.4
SOX1O00570 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.54■□□□□ 0.4
SOX1O00570 RN7SL399P-201ENST00000471648 279 ntBASIC17.54■□□□□ 0.4
SOX1O00570 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.54■□□□□ 0.4
SOX1O00570 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SOX1O00570 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC17.54■□□□□ 0.4
SOX1O00570 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.54■□□□□ 0.4
SOX1O00570 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SOX1O00570 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.54■□□□□ 0.4
SOX1O00570 AC079316.1-201ENST00000548397 411 ntBASIC17.54■□□□□ 0.4
SOX1O00570 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.54■□□□□ 0.4
SOX1O00570 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.54■□□□□ 0.4
SOX1O00570 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.54■□□□□ 0.4
SOX1O00570 AC133539.2-201ENST00000604757 467 ntBASIC17.54■□□□□ 0.4
SOX1O00570 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SOX1O00570 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SOX1O00570 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SOX1O00570 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
SOX1O00570 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SOX1O00570 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SOX1O00570 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.54■□□□□ 0.4
SOX1O00570 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SOX1O00570 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SOX1O00570 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
SOX1O00570 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.54■□□□□ 0.4
SOX1O00570 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.54■□□□□ 0.4
SOX1O00570 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SOX1O00570 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SOX1O00570 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SOX1O00570 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SOX1O00570 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SOX1O00570 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SOX1O00570 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SOX1O00570 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SOX1O00570 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SOX1O00570 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SOX1O00570 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.53■□□□□ 0.4
SOX1O00570 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SOX1O00570 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SOX1O00570 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms