Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 RNA5SP415-201ENST00000517246 115 ntBASIC17.9■□□□□ 0.46
FOXN3O00409 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.9■□□□□ 0.46
FOXN3O00409 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.9■□□□□ 0.46
FOXN3O00409 AP001350.2-201ENST00000625104 1094 ntBASIC17.9■□□□□ 0.46
FOXN3O00409 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
FOXN3O00409 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
FOXN3O00409 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.9■□□□□ 0.46
FOXN3O00409 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
FOXN3O00409 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
FOXN3O00409 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.9■□□□□ 0.46
FOXN3O00409 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.9■□□□□ 0.46
FOXN3O00409 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXN3O00409 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.9■□□□□ 0.46
FOXN3O00409 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXN3O00409 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXN3O00409 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.9■□□□□ 0.46
FOXN3O00409 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.9■□□□□ 0.46
FOXN3O00409 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.9■□□□□ 0.46
FOXN3O00409 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
FOXN3O00409 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.9■□□□□ 0.46
FOXN3O00409 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
FOXN3O00409 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
FOXN3O00409 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.89■□□□□ 0.45
FOXN3O00409 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FOXN3O00409 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.89■□□□□ 0.45
FOXN3O00409 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FOXN3O00409 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXN3O00409 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FOXN3O00409 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXN3O00409 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.89■□□□□ 0.45
FOXN3O00409 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.89■□□□□ 0.45
FOXN3O00409 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FOXN3O00409 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.89■□□□□ 0.45
FOXN3O00409 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.89■□□□□ 0.45
FOXN3O00409 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
FOXN3O00409 AL662844.1-201ENST00000546340 181 ntBASIC17.89■□□□□ 0.45
FOXN3O00409 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.89■□□□□ 0.45
FOXN3O00409 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.89■□□□□ 0.45
FOXN3O00409 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.89■□□□□ 0.45
FOXN3O00409 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXN3O00409 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.89■□□□□ 0.45
FOXN3O00409 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FOXN3O00409 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXN3O00409 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
FOXN3O00409 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXN3O00409 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXN3O00409 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
FOXN3O00409 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.89■□□□□ 0.45
FOXN3O00409 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.89■□□□□ 0.45
FOXN3O00409 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXN3O00409 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
FOXN3O00409 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.89■□□□□ 0.45
FOXN3O00409 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FOXN3O00409 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.88■□□□□ 0.45
FOXN3O00409 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXN3O00409 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.88■□□□□ 0.45
FOXN3O00409 AC012569.1-201ENST00000591191 1524 ntBASIC17.88■□□□□ 0.45
FOXN3O00409 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FOXN3O00409 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.88■□□□□ 0.45
FOXN3O00409 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXN3O00409 LINC02199-201ENST00000506655 2702 ntBASIC17.88■□□□□ 0.45
FOXN3O00409 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXN3O00409 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
FOXN3O00409 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.88■□□□□ 0.45
FOXN3O00409 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXN3O00409 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FOXN3O00409 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXN3O00409 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
FOXN3O00409 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.88■□□□□ 0.45
FOXN3O00409 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.88■□□□□ 0.45
FOXN3O00409 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.88■□□□□ 0.45
FOXN3O00409 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXN3O00409 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXN3O00409 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.88■□□□□ 0.45
FOXN3O00409 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.88■□□□□ 0.45
FOXN3O00409 VN2R19P-201ENST00000442399 1052 ntBASIC17.88■□□□□ 0.45
FOXN3O00409 CXCL1P1-201ENST00000502804 216 ntBASIC17.88■□□□□ 0.45
FOXN3O00409 AC093909.1-201ENST00000504731 1122 ntBASIC17.88■□□□□ 0.45
FOXN3O00409 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.88■□□□□ 0.45
FOXN3O00409 MIR4751-201ENST00000578027 74 ntBASIC17.88■□□□□ 0.45
FOXN3O00409 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.88■□□□□ 0.45
FOXN3O00409 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXN3O00409 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.88■□□□□ 0.45
FOXN3O00409 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.88■□□□□ 0.45
FOXN3O00409 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
FOXN3O00409 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FOXN3O00409 GPAA1P2-202ENST00000606848 1787 ntBASIC17.88■□□□□ 0.45
FOXN3O00409 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXN3O00409 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.88■□□□□ 0.45
FOXN3O00409 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.88■□□□□ 0.45
FOXN3O00409 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
FOXN3O00409 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
FOXN3O00409 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
FOXN3O00409 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
FOXN3O00409 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.88■□□□□ 0.45
FOXN3O00409 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXN3O00409 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
FOXN3O00409 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
FOXN3O00409 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
FOXN3O00409 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms