Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC188H7C350 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC188H7C350 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC188H7C350 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC188H7C350 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CCDC188H7C350 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC188H7C350 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.42■□□□□ 0.38
CCDC188H7C350 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC188H7C350 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.42■□□□□ 0.38
CCDC188H7C350 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC188H7C350 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.42■□□□□ 0.38
CCDC188H7C350 AL353135.1-201ENST00000606729 504 ntBASIC17.42■□□□□ 0.38
CCDC188H7C350 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC188H7C350 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.42■□□□□ 0.38
CCDC188H7C350 AL590326.2-201ENST00000625139 305 ntBASIC17.42■□□□□ 0.38
CCDC188H7C350 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC188H7C350 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC188H7C350 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC188H7C350 AP005117.1-202ENST00000581724 1908 ntBASIC17.42■□□□□ 0.38
CCDC188H7C350 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC188H7C350 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC188H7C350 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.42■□□□□ 0.38
CCDC188H7C350 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC188H7C350 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCDC188H7C350 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CCDC188H7C350 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CCDC188H7C350 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC188H7C350 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC188H7C350 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC188H7C350 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC188H7C350 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC188H7C350 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC188H7C350 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC188H7C350 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC188H7C350 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC188H7C350 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC188H7C350 AC079776.2-201ENST00000641154 1609 ntBASIC17.41■□□□□ 0.38
CCDC188H7C350 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.41■□□□□ 0.38
CCDC188H7C350 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC188H7C350 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CCDC188H7C350 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CCDC188H7C350 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.41■□□□□ 0.38
CCDC188H7C350 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC188H7C350 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC188H7C350 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC188H7C350 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC188H7C350 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CCDC188H7C350 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC188H7C350 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CCDC188H7C350 AC010331.1-201ENST00000611423 582 ntBASIC17.41■□□□□ 0.38
CCDC188H7C350 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC188H7C350 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC188H7C350 TSPY26P-202ENST00000565928 3884 ntBASIC17.41■□□□□ 0.38
CCDC188H7C350 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC188H7C350 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC188H7C350 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC188H7C350 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC188H7C350 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC188H7C350 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CCDC188H7C350 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC188H7C350 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC188H7C350 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC188H7C350 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC188H7C350 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CCDC188H7C350 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC188H7C350 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC188H7C350 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC188H7C350 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CCDC188H7C350 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC188H7C350 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC188H7C350 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC188H7C350 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC188H7C350 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC188H7C350 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC188H7C350 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC188H7C350 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC188H7C350 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC188H7C350 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC188H7C350 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC188H7C350 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCDC188H7C350 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC188H7C350 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC188H7C350 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC188H7C350 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC188H7C350 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC188H7C350 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.4■□□□□ 0.38
CCDC188H7C350 MIR4492-201ENST00000581627 80 ntBASIC17.4■□□□□ 0.38
CCDC188H7C350 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC188H7C350 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
CCDC188H7C350 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC188H7C350 AC114341.1-201ENST00000618070 349 ntBASIC17.4■□□□□ 0.38
CCDC188H7C350 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC188H7C350 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC188H7C350 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC188H7C350 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CCDC188H7C350 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC188H7C350 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC188H7C350 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC188H7C350 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC188H7C350 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms