Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 FER1L4-210ENST00000615531 5998 ntBASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 ALOX12P2-203ENST00000570921 1945 ntBASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 PRSS29P-201ENST00000440800 595 ntBASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 FAM185BP-201ENST00000443595 716 ntBASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 AL512652.2-201ENST00000625156 1716 ntBASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CCDC162PA2VCL2 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 KRT8P39-201ENST00000396270 1433 ntBASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 VN2R19P-201ENST00000442399 1052 ntBASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 FDX1P1-201ENST00000449115 551 ntBASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 AC087641.1-201ENST00000557561 1021 ntBASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC162PA2VCL2 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.73■□□□□ 0.27
CCDC162PA2VCL2 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC162PA2VCL2 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CCDC162PA2VCL2 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC162PA2VCL2 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC162PA2VCL2 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CCDC162PA2VCL2 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC162PA2VCL2 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC162PA2VCL2 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC162PA2VCL2 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC162PA2VCL2 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC162PA2VCL2 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC162PA2VCL2 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.73■□□□□ 0.27
CCDC162PA2VCL2 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
CCDC162PA2VCL2 AC079776.4-201ENST00000511039 504 ntBASIC16.73■□□□□ 0.27
CCDC162PA2VCL2 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.73■□□□□ 0.27
CCDC162PA2VCL2 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC162PA2VCL2 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.73■□□□□ 0.27
CCDC162PA2VCL2 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC162PA2VCL2 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC162PA2VCL2 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC162PA2VCL2 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC162PA2VCL2 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.73■□□□□ 0.27
CCDC162PA2VCL2 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms