Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC24.45■■□□□ 1.51
HFM1A2PYH4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
HFM1A2PYH4 CCDC74BP1-201ENST00000508880 1123 ntBASIC24.45■■□□□ 1.51
HFM1A2PYH4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.51
HFM1A2PYH4 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC24.45■■□□□ 1.51
HFM1A2PYH4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC24.45■■□□□ 1.5
HFM1A2PYH4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
HFM1A2PYH4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC24.45■■□□□ 1.5
HFM1A2PYH4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC24.45■■□□□ 1.5
HFM1A2PYH4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
HFM1A2PYH4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC24.45■■□□□ 1.5
HFM1A2PYH4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC24.45■■□□□ 1.5
HFM1A2PYH4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
HFM1A2PYH4 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
HFM1A2PYH4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC24.45■■□□□ 1.5
HFM1A2PYH4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
HFM1A2PYH4 ME2P1-201ENST00000426028 1970 ntBASIC24.44■■□□□ 1.5
HFM1A2PYH4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
HFM1A2PYH4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
HFM1A2PYH4 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
HFM1A2PYH4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC24.44■■□□□ 1.5
HFM1A2PYH4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC24.44■■□□□ 1.5
HFM1A2PYH4 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
HFM1A2PYH4 RNA5SP410-201ENST00000516285 106 ntBASIC24.44■■□□□ 1.5
HFM1A2PYH4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC24.44■■□□□ 1.5
HFM1A2PYH4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC24.44■■□□□ 1.5
HFM1A2PYH4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC24.44■■□□□ 1.5
HFM1A2PYH4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
HFM1A2PYH4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
HFM1A2PYH4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC24.44■■□□□ 1.5
HFM1A2PYH4 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
HFM1A2PYH4 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
HFM1A2PYH4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
HFM1A2PYH4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
HFM1A2PYH4 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC24.44■■□□□ 1.5
HFM1A2PYH4 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
HFM1A2PYH4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
HFM1A2PYH4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
HFM1A2PYH4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC24.44■■□□□ 1.5
HFM1A2PYH4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
HFM1A2PYH4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC24.44■■□□□ 1.5
HFM1A2PYH4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
HFM1A2PYH4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
HFM1A2PYH4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
HFM1A2PYH4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
HFM1A2PYH4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
HFM1A2PYH4 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC24.44■■□□□ 1.5
HFM1A2PYH4 AL080243.2-201ENST00000418783 582 ntBASIC24.44■■□□□ 1.5
HFM1A2PYH4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC24.44■■□□□ 1.5
HFM1A2PYH4 AL133215.2-201ENST00000609242 977 ntBASIC24.44■■□□□ 1.5
HFM1A2PYH4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC24.44■■□□□ 1.5
HFM1A2PYH4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
HFM1A2PYH4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
HFM1A2PYH4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC24.43■■□□□ 1.5
HFM1A2PYH4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
HFM1A2PYH4 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
HFM1A2PYH4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
HFM1A2PYH4 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC24.43■■□□□ 1.5
HFM1A2PYH4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
HFM1A2PYH4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
HFM1A2PYH4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC24.43■■□□□ 1.5
HFM1A2PYH4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC24.43■■□□□ 1.5
HFM1A2PYH4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
HFM1A2PYH4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC24.43■■□□□ 1.5
HFM1A2PYH4 TREML5P-201ENST00000421694 576 ntBASIC24.43■■□□□ 1.5
HFM1A2PYH4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC24.43■■□□□ 1.5
HFM1A2PYH4 POU5F1P6-201ENST00000466990 990 ntBASIC24.43■■□□□ 1.5
HFM1A2PYH4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
HFM1A2PYH4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
HFM1A2PYH4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
HFM1A2PYH4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
HFM1A2PYH4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC24.42■■□□□ 1.5
HFM1A2PYH4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
HFM1A2PYH4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
HFM1A2PYH4 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC24.42■■□□□ 1.5
HFM1A2PYH4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
HFM1A2PYH4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
HFM1A2PYH4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
HFM1A2PYH4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
HFM1A2PYH4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
HFM1A2PYH4 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC24.42■■□□□ 1.5
HFM1A2PYH4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
HFM1A2PYH4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
HFM1A2PYH4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
HFM1A2PYH4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC24.42■■□□□ 1.5
HFM1A2PYH4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC24.42■■□□□ 1.5
HFM1A2PYH4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC24.42■■□□□ 1.5
HFM1A2PYH4 FO538757.1-201ENST00000623083 1397 ntBASIC24.42■■□□□ 1.5
HFM1A2PYH4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC24.42■■□□□ 1.5
HFM1A2PYH4 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
HFM1A2PYH4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
HFM1A2PYH4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
HFM1A2PYH4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC24.42■■□□□ 1.5
HFM1A2PYH4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
HFM1A2PYH4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
HFM1A2PYH4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
HFM1A2PYH4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
HFM1A2PYH4 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
HFM1A2PYH4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
HFM1A2PYH4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms