Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC187A0A096LP49 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC187A0A096LP49 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CCDC187A0A096LP49 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CCDC187A0A096LP49 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC187A0A096LP49 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CCDC187A0A096LP49 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC187A0A096LP49 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC187A0A096LP49 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC187A0A096LP49 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC187A0A096LP49 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC187A0A096LP49 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC187A0A096LP49 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC187A0A096LP49 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC187A0A096LP49 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CCDC187A0A096LP49 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC187A0A096LP49 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC187A0A096LP49 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC187A0A096LP49 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.77■□□□□ 0.12
CCDC187A0A096LP49 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC187A0A096LP49 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.77■□□□□ 0.12
CCDC187A0A096LP49 MEIS3P1-201ENST00000495167 958 ntBASIC15.77■□□□□ 0.12
CCDC187A0A096LP49 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC187A0A096LP49 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.77■□□□□ 0.12
CCDC187A0A096LP49 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC187A0A096LP49 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC187A0A096LP49 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.77■□□□□ 0.12
CCDC187A0A096LP49 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.77■□□□□ 0.12
CCDC187A0A096LP49 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC187A0A096LP49 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC187A0A096LP49 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.77■□□□□ 0.11
CCDC187A0A096LP49 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.77■□□□□ 0.11
CCDC187A0A096LP49 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CCDC187A0A096LP49 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC187A0A096LP49 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC187A0A096LP49 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CCDC187A0A096LP49 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC187A0A096LP49 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC187A0A096LP49 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CCDC187A0A096LP49 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC187A0A096LP49 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.76■□□□□ 0.11
CCDC187A0A096LP49 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.76■□□□□ 0.11
CCDC187A0A096LP49 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CCDC187A0A096LP49 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC187A0A096LP49 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.76■□□□□ 0.11
CCDC187A0A096LP49 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CCDC187A0A096LP49 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC187A0A096LP49 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC187A0A096LP49 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.76■□□□□ 0.11
CCDC187A0A096LP49 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.76■□□□□ 0.11
CCDC187A0A096LP49 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.76■□□□□ 0.11
CCDC187A0A096LP49 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.76■□□□□ 0.11
CCDC187A0A096LP49 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.76■□□□□ 0.11
CCDC187A0A096LP49 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC187A0A096LP49 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.76■□□□□ 0.11
CCDC187A0A096LP49 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.76■□□□□ 0.11
CCDC187A0A096LP49 RN7SL828P-201ENST00000607615 303 ntBASIC15.76■□□□□ 0.11
CCDC187A0A096LP49 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC187A0A096LP49 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC187A0A096LP49 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC187A0A096LP49 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC187A0A096LP49 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CCDC187A0A096LP49 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
CCDC187A0A096LP49 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC187A0A096LP49 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC187A0A096LP49 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC187A0A096LP49 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC187A0A096LP49 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
CCDC187A0A096LP49 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
CCDC187A0A096LP49 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 AL138688.1-201ENST00000624851 1594 ntBASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 TUBB8P12-201ENST00000308911 1335 ntBASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 TUBB7P-202ENST00000428444 1305 ntBASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 TUBB8P7-204ENST00000567960 1332 ntBASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 AC108860.2-201ENST00000562760 2183 ntBASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.75■□□□□ 0.11
CCDC187A0A096LP49 AC098859.1-201ENST00000502915 1238 ntBASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms