Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 AL021920.2-201ENST00000624828 1351 ntBASIC15.88■□□□□ 0.13
AP4S1Q9Y587 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 STK19B-204ENST00000512515 211 ntBASIC15.88■□□□□ 0.13
AP4S1Q9Y587 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP4S1Q9Y587 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
AP4S1Q9Y587 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
AP4S1Q9Y587 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.87■□□□□ 0.13
AP4S1Q9Y587 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
AP4S1Q9Y587 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
AP4S1Q9Y587 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP4S1Q9Y587 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
AP4S1Q9Y587 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP4S1Q9Y587 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP4S1Q9Y587 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.87■□□□□ 0.13
AP4S1Q9Y587 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.87■□□□□ 0.13
AP4S1Q9Y587 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.87■□□□□ 0.13
AP4S1Q9Y587 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP4S1Q9Y587 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP4S1Q9Y587 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP4S1Q9Y587 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
AP4S1Q9Y587 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.87■□□□□ 0.13
AP4S1Q9Y587 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
AP4S1Q9Y587 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15.87■□□□□ 0.13
AP4S1Q9Y587 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP4S1Q9Y587 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
AP4S1Q9Y587 DUX4L17-201ENST00000557360 1267 ntBASIC15.87■□□□□ 0.13
AP4S1Q9Y587 AC142381.4-202ENST00000563973 229 ntBASIC15.87■□□□□ 0.13
AP4S1Q9Y587 GPR32P1-201ENST00000601788 811 ntBASIC15.87■□□□□ 0.13
AP4S1Q9Y587 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.87■□□□□ 0.13
AP4S1Q9Y587 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.87■□□□□ 0.13
AP4S1Q9Y587 AL139011.1-202ENST00000642063 584 ntBASIC15.87■□□□□ 0.13
AP4S1Q9Y587 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP4S1Q9Y587 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
AP4S1Q9Y587 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
AP4S1Q9Y587 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.87■□□□□ 0.13
AP4S1Q9Y587 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP4S1Q9Y587 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.87■□□□□ 0.13
AP4S1Q9Y587 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
AP4S1Q9Y587 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP4S1Q9Y587 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP4S1Q9Y587 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.87■□□□□ 0.13
AP4S1Q9Y587 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.87■□□□□ 0.13
AP4S1Q9Y587 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
AP4S1Q9Y587 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
AP4S1Q9Y587 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.86■□□□□ 0.13
AP4S1Q9Y587 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
AP4S1Q9Y587 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP4S1Q9Y587 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
AP4S1Q9Y587 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
AP4S1Q9Y587 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP4S1Q9Y587 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP4S1Q9Y587 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP4S1Q9Y587 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP4S1Q9Y587 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
AP4S1Q9Y587 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.86■□□□□ 0.13
AP4S1Q9Y587 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP4S1Q9Y587 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP4S1Q9Y587 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.86■□□□□ 0.13
AP4S1Q9Y587 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP4S1Q9Y587 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
AP4S1Q9Y587 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.86■□□□□ 0.13
AP4S1Q9Y587 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.86■□□□□ 0.13
AP4S1Q9Y587 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP4S1Q9Y587 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.86■□□□□ 0.13
AP4S1Q9Y587 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms