Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 RN7SL204P-201ENST00000582831 262 ntBASIC17.37■□□□□ 0.37
YIPF1Q9Y548 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.37■□□□□ 0.37
YIPF1Q9Y548 AL645728.1-201ENST00000366221 2101 ntBASIC17.36■□□□□ 0.37
YIPF1Q9Y548 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 FZD10-202ENST00000539839 3282 ntBASIC17.36■□□□□ 0.37
YIPF1Q9Y548 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 TERF1P3-201ENST00000505638 1227 ntBASIC17.36■□□□□ 0.37
YIPF1Q9Y548 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 AC027369.6-201ENST00000525520 931 ntBASIC17.36■□□□□ 0.37
YIPF1Q9Y548 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.36■□□□□ 0.37
YIPF1Q9Y548 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.36■□□□□ 0.37
YIPF1Q9Y548 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.36■□□□□ 0.37
YIPF1Q9Y548 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.35■□□□□ 0.37
YIPF1Q9Y548 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 AL353705.2-201ENST00000428243 662 ntBASIC17.35■□□□□ 0.37
YIPF1Q9Y548 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
YIPF1Q9Y548 AC100757.3-201ENST00000622361 1406 ntBASIC17.35■□□□□ 0.37
YIPF1Q9Y548 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms