Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 LINC00895-201ENST00000629028 1637 ntBASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LINC00588Q9Y4M8 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 AL671710.1-201ENST00000610245 2349 ntBASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 FAM58DP-201ENST00000428076 619 ntBASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 KRT18P34-201ENST00000488218 1270 ntBASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 AP002490.2-201ENST00000524791 560 ntBASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 LINC01225-203ENST00000563550 1244 ntBASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 AC027307.2-201ENST00000591252 911 ntBASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 AC008267.7-201ENST00000624570 1194 ntBASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 ORC5-208ENST00000626700 344 ntTSL 3 BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 CEP83-AS1-201ENST00000623122 2482 ntBASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC00588Q9Y4M8 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 AL391256.1-201ENST00000443260 1855 ntBASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 HMGN1P19-201ENST00000436976 333 ntBASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 RBPMS2P1-201ENST00000437762 623 ntBASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC00588Q9Y4M8 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms