Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH1Q9Y2L9 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH1Q9Y2L9 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.97■□□□□ 0.15
LRCH1Q9Y2L9 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.97■□□□□ 0.15
LRCH1Q9Y2L9 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH1Q9Y2L9 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.97■□□□□ 0.15
LRCH1Q9Y2L9 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.97■□□□□ 0.15
LRCH1Q9Y2L9 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.97■□□□□ 0.15
LRCH1Q9Y2L9 AC128688.1-201ENST00000487626 519 ntBASIC15.97■□□□□ 0.15
LRCH1Q9Y2L9 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH1Q9Y2L9 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.97■□□□□ 0.15
LRCH1Q9Y2L9 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH1Q9Y2L9 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
LRCH1Q9Y2L9 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.97■□□□□ 0.15
LRCH1Q9Y2L9 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
LRCH1Q9Y2L9 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH1Q9Y2L9 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH1Q9Y2L9 AC139749.1-202ENST00000617529 3139 ntBASIC15.97■□□□□ 0.15
LRCH1Q9Y2L9 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.97■□□□□ 0.15
LRCH1Q9Y2L9 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH1Q9Y2L9 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH1Q9Y2L9 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH1Q9Y2L9 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH1Q9Y2L9 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH1Q9Y2L9 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRCH1Q9Y2L9 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 HLA-J-202ENST00000469281 1241 ntBASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 EGLN1P1-201ENST00000531623 762 ntBASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 AC010947.1-201ENST00000623454 693 ntBASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
LRCH1Q9Y2L9 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
LRCH1Q9Y2L9 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.96■□□□□ 0.14
LRCH1Q9Y2L9 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
LRCH1Q9Y2L9 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
LRCH1Q9Y2L9 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.96■□□□□ 0.14
LRCH1Q9Y2L9 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 CICP14-201ENST00000629111 2732 ntBASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 TSPY14P-201ENST00000303979 915 ntBASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 FAM210CP-201ENST00000445714 574 ntBASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 AC008040.2-201ENST00000461049 708 ntBASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 AC005363.2-201ENST00000618631 242 ntBASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms