Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 HLA-H-201ENST00000383620 1096 ntBASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 AC241585.1-201ENST00000433527 519 ntBASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 TERF1P3-201ENST00000505638 1227 ntBASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 SPTSSB-204ENST00000617024 1292 ntBASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 AL590560.3-201ENST00000623350 461 ntBASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
FBXO28Q9NVF7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FBXO28Q9NVF7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.11■□□□□ 0.65
FBXO28Q9NVF7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
FBXO28Q9NVF7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.11■□□□□ 0.65
FBXO28Q9NVF7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FBXO28Q9NVF7 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
FBXO28Q9NVF7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.11■□□□□ 0.65
FBXO28Q9NVF7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.11■□□□□ 0.65
FBXO28Q9NVF7 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FBXO28Q9NVF7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
FBXO28Q9NVF7 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FBXO28Q9NVF7 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FBXO28Q9NVF7 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.11■□□□□ 0.65
FBXO28Q9NVF7 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
FBXO28Q9NVF7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
FBXO28Q9NVF7 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.11■□□□□ 0.65
FBXO28Q9NVF7 AC015922.1-201ENST00000421102 1152 ntBASIC19.11■□□□□ 0.65
FBXO28Q9NVF7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.11■□□□□ 0.65
FBXO28Q9NVF7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.11■□□□□ 0.65
FBXO28Q9NVF7 AC008761.3-201ENST00000624803 892 ntBASIC19.11■□□□□ 0.65
FBXO28Q9NVF7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
FBXO28Q9NVF7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FBXO28Q9NVF7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
FBXO28Q9NVF7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.11■□□□□ 0.65
FBXO28Q9NVF7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.11■□□□□ 0.65
FBXO28Q9NVF7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
FBXO28Q9NVF7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.11■□□□□ 0.65
FBXO28Q9NVF7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.11■□□□□ 0.65
FBXO28Q9NVF7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
FBXO28Q9NVF7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.11■□□□□ 0.65
FBXO28Q9NVF7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
FBXO28Q9NVF7 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FBXO28Q9NVF7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
FBXO28Q9NVF7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.1■□□□□ 0.65
FBXO28Q9NVF7 PCDHB18P-201ENST00000524813 2368 ntBASIC19.1■□□□□ 0.65
FBXO28Q9NVF7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FBXO28Q9NVF7 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.1■□□□□ 0.65
FBXO28Q9NVF7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FBXO28Q9NVF7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FBXO28Q9NVF7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
FBXO28Q9NVF7 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.1■□□□□ 0.65
FBXO28Q9NVF7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.1■□□□□ 0.65
FBXO28Q9NVF7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.1■□□□□ 0.65
FBXO28Q9NVF7 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.1■□□□□ 0.65
FBXO28Q9NVF7 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC19.1■□□□□ 0.65
FBXO28Q9NVF7 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.1■□□□□ 0.65
FBXO28Q9NVF7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.1■□□□□ 0.65
FBXO28Q9NVF7 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.1■□□□□ 0.65
FBXO28Q9NVF7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.1■□□□□ 0.65
FBXO28Q9NVF7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FBXO28Q9NVF7 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FBXO28Q9NVF7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
FBXO28Q9NVF7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
FBXO28Q9NVF7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.1■□□□□ 0.65
FBXO28Q9NVF7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms