Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TREX1Q9NSU2 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.66■□□□□ 0.26
TREX1Q9NSU2 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TREX1Q9NSU2 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.66■□□□□ 0.26
TREX1Q9NSU2 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TREX1Q9NSU2 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
TREX1Q9NSU2 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TREX1Q9NSU2 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TREX1Q9NSU2 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TREX1Q9NSU2 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.66■□□□□ 0.26
TREX1Q9NSU2 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TREX1Q9NSU2 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.66■□□□□ 0.26
TREX1Q9NSU2 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TREX1Q9NSU2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TREX1Q9NSU2 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.66■□□□□ 0.26
TREX1Q9NSU2 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.66■□□□□ 0.26
TREX1Q9NSU2 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
TREX1Q9NSU2 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TREX1Q9NSU2 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TREX1Q9NSU2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.66■□□□□ 0.26
TREX1Q9NSU2 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.66■□□□□ 0.26
TREX1Q9NSU2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TREX1Q9NSU2 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TREX1Q9NSU2 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.66■□□□□ 0.26
TREX1Q9NSU2 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TREX1Q9NSU2 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.66■□□□□ 0.26
TREX1Q9NSU2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TREX1Q9NSU2 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TREX1Q9NSU2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.66■□□□□ 0.26
TREX1Q9NSU2 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
TREX1Q9NSU2 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
TREX1Q9NSU2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TREX1Q9NSU2 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TREX1Q9NSU2 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.65■□□□□ 0.26
TREX1Q9NSU2 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TREX1Q9NSU2 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TREX1Q9NSU2 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.65■□□□□ 0.26
TREX1Q9NSU2 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.65■□□□□ 0.26
TREX1Q9NSU2 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.65■□□□□ 0.26
TREX1Q9NSU2 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
TREX1Q9NSU2 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
TREX1Q9NSU2 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
TREX1Q9NSU2 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TREX1Q9NSU2 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.65■□□□□ 0.26
TREX1Q9NSU2 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.65■□□□□ 0.26
TREX1Q9NSU2 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TREX1Q9NSU2 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
TREX1Q9NSU2 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TREX1Q9NSU2 RNU1-129P-201ENST00000384064 167 ntBASIC16.65■□□□□ 0.26
TREX1Q9NSU2 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.65■□□□□ 0.26
TREX1Q9NSU2 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.65■□□□□ 0.26
TREX1Q9NSU2 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TREX1Q9NSU2 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TREX1Q9NSU2 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TREX1Q9NSU2 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.65■□□□□ 0.26
TREX1Q9NSU2 U1.21-201ENST00000580816 167 ntBASIC16.65■□□□□ 0.26
TREX1Q9NSU2 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.65■□□□□ 0.26
TREX1Q9NSU2 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.65■□□□□ 0.26
TREX1Q9NSU2 AL645728.2-201ENST00000641974 660 ntBASIC16.65■□□□□ 0.26
TREX1Q9NSU2 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TREX1Q9NSU2 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TREX1Q9NSU2 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.65■□□□□ 0.26
TREX1Q9NSU2 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TREX1Q9NSU2 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TREX1Q9NSU2 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TREX1Q9NSU2 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TREX1Q9NSU2 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TREX1Q9NSU2 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TREX1Q9NSU2 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TREX1Q9NSU2 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TREX1Q9NSU2 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.65■□□□□ 0.26
TREX1Q9NSU2 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TREX1Q9NSU2 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
TREX1Q9NSU2 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
TREX1Q9NSU2 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
TREX1Q9NSU2 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TREX1Q9NSU2 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TREX1Q9NSU2 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TREX1Q9NSU2 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TREX1Q9NSU2 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TREX1Q9NSU2 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TREX1Q9NSU2 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.64■□□□□ 0.25
TREX1Q9NSU2 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TREX1Q9NSU2 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TREX1Q9NSU2 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TREX1Q9NSU2 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TREX1Q9NSU2 CRYGEP-201ENST00000412192 528 ntBASIC16.64■□□□□ 0.25
TREX1Q9NSU2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TREX1Q9NSU2 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.64■□□□□ 0.25
TREX1Q9NSU2 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.64■□□□□ 0.25
TREX1Q9NSU2 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
TREX1Q9NSU2 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TREX1Q9NSU2 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TREX1Q9NSU2 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.64■□□□□ 0.25
TREX1Q9NSU2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
TREX1Q9NSU2 MIR3909-201ENST00000579518 119 ntBASIC16.64■□□□□ 0.25
TREX1Q9NSU2 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TREX1Q9NSU2 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TREX1Q9NSU2 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.64■□□□□ 0.25
TREX1Q9NSU2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms