Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 AC012569.1-201ENST00000591191 1524 ntBASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
PRDM9Q9NQV7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
PRDM9Q9NQV7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
PRDM9Q9NQV7 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PRDM9Q9NQV7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PRDM9Q9NQV7 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.83■□□□□ 0.13
PRDM9Q9NQV7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.83■□□□□ 0.13
PRDM9Q9NQV7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PRDM9Q9NQV7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PRDM9Q9NQV7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
PRDM9Q9NQV7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.83■□□□□ 0.13
PRDM9Q9NQV7 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
PRDM9Q9NQV7 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
PRDM9Q9NQV7 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PRDM9Q9NQV7 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRDM9Q9NQV7 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRDM9Q9NQV7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PRDM9Q9NQV7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRDM9Q9NQV7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRDM9Q9NQV7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRDM9Q9NQV7 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PRDM9Q9NQV7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.83■□□□□ 0.12
PRDM9Q9NQV7 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.83■□□□□ 0.12
PRDM9Q9NQV7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.83■□□□□ 0.12
PRDM9Q9NQV7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRDM9Q9NQV7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRDM9Q9NQV7 DNAJB3-201ENST00000446806 729 ntBASIC15.83■□□□□ 0.12
PRDM9Q9NQV7 AC074386.1-202ENST00000463561 864 ntBASIC15.83■□□□□ 0.12
PRDM9Q9NQV7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.83■□□□□ 0.12
PRDM9Q9NQV7 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.83■□□□□ 0.12
PRDM9Q9NQV7 CYP2A7P1-201ENST00000595391 815 ntBASIC15.83■□□□□ 0.12
PRDM9Q9NQV7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.83■□□□□ 0.12
PRDM9Q9NQV7 MTDHP5-201ENST00000598980 586 ntBASIC15.83■□□□□ 0.12
PRDM9Q9NQV7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.83■□□□□ 0.12
PRDM9Q9NQV7 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRDM9Q9NQV7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRDM9Q9NQV7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PRDM9Q9NQV7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
PRDM9Q9NQV7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
PRDM9Q9NQV7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRDM9Q9NQV7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRDM9Q9NQV7 AL391005.1-201ENST00000623953 2435 ntBASIC15.83■□□□□ 0.12
PRDM9Q9NQV7 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PRDM9Q9NQV7 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
PRDM9Q9NQV7 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 MCCD1P2-201ENST00000423228 335 ntBASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 AC084018.2-201ENST00000613093 2607 ntBASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 SNX33P1-201ENST00000592116 1762 ntBASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 HLA-A-202ENST00000376806 1854 ntBASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 AL603756.1-201ENST00000606511 2163 ntBASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
PRDM9Q9NQV7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRDM9Q9NQV7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms