Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP6V0A4Q9HBG4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATP6V0A4Q9HBG4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.59■□□□□ 0.57
ATP6V0A4Q9HBG4 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.59■□□□□ 0.57
ATP6V0A4Q9HBG4 AC109635.5-201ENST00000533593 962 ntBASIC18.59■□□□□ 0.57
ATP6V0A4Q9HBG4 MIR3909-201ENST00000579518 119 ntBASIC18.59■□□□□ 0.57
ATP6V0A4Q9HBG4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.59■□□□□ 0.57
ATP6V0A4Q9HBG4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.59■□□□□ 0.57
ATP6V0A4Q9HBG4 AC099522.2-201ENST00000607001 744 ntBASIC18.59■□□□□ 0.57
ATP6V0A4Q9HBG4 AC105339.1-204ENST00000636249 355 ntBASIC18.59■□□□□ 0.57
ATP6V0A4Q9HBG4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.59■□□□□ 0.57
ATP6V0A4Q9HBG4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ATP6V0A4Q9HBG4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.59■□□□□ 0.57
ATP6V0A4Q9HBG4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP6V0A4Q9HBG4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP6V0A4Q9HBG4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.59■□□□□ 0.57
ATP6V0A4Q9HBG4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP6V0A4Q9HBG4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ATP6V0A4Q9HBG4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATP6V0A4Q9HBG4 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.59■□□□□ 0.57
ATP6V0A4Q9HBG4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.59■□□□□ 0.57
ATP6V0A4Q9HBG4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATP6V0A4Q9HBG4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.58■□□□□ 0.57
ATP6V0A4Q9HBG4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ATP6V0A4Q9HBG4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ATP6V0A4Q9HBG4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ATP6V0A4Q9HBG4 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.58■□□□□ 0.57
ATP6V0A4Q9HBG4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
ATP6V0A4Q9HBG4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATP6V0A4Q9HBG4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATP6V0A4Q9HBG4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
ATP6V0A4Q9HBG4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.58■□□□□ 0.57
ATP6V0A4Q9HBG4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ATP6V0A4Q9HBG4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
ATP6V0A4Q9HBG4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.57
ATP6V0A4Q9HBG4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
ATP6V0A4Q9HBG4 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.58■□□□□ 0.56
ATP6V0A4Q9HBG4 AC008894.3-201ENST00000624324 3103 ntBASIC18.58■□□□□ 0.56
ATP6V0A4Q9HBG4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.58■□□□□ 0.56
ATP6V0A4Q9HBG4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
ATP6V0A4Q9HBG4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP6V0A4Q9HBG4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP6V0A4Q9HBG4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP6V0A4Q9HBG4 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
ATP6V0A4Q9HBG4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.58■□□□□ 0.56
ATP6V0A4Q9HBG4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ATP6V0A4Q9HBG4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
ATP6V0A4Q9HBG4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ATP6V0A4Q9HBG4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
ATP6V0A4Q9HBG4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.58■□□□□ 0.56
ATP6V0A4Q9HBG4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.58■□□□□ 0.56
ATP6V0A4Q9HBG4 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.58■□□□□ 0.56
ATP6V0A4Q9HBG4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.58■□□□□ 0.56
ATP6V0A4Q9HBG4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
ATP6V0A4Q9HBG4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.58■□□□□ 0.56
ATP6V0A4Q9HBG4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
ATP6V0A4Q9HBG4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
ATP6V0A4Q9HBG4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
ATP6V0A4Q9HBG4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP6V0A4Q9HBG4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATP6V0A4Q9HBG4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ATP6V0A4Q9HBG4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 AC004461.1-201ENST00000412461 403 ntBASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 AC004449.1-201ENST00000564240 433 ntBASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 AC093028.1-201ENST00000622998 982 ntBASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATP6V0A4Q9HBG4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms