Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16■□□□□ 0.15
BRF2Q9HAW0 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16■□□□□ 0.15
BRF2Q9HAW0 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16■□□□□ 0.15
BRF2Q9HAW0 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BRF2Q9HAW0 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
BRF2Q9HAW0 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
BRF2Q9HAW0 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16■□□□□ 0.15
BRF2Q9HAW0 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16■□□□□ 0.15
BRF2Q9HAW0 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
BRF2Q9HAW0 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16■□□□□ 0.15
BRF2Q9HAW0 AP002469.2-201ENST00000531724 424 ntBASIC16■□□□□ 0.15
BRF2Q9HAW0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16■□□□□ 0.15
BRF2Q9HAW0 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
BRF2Q9HAW0 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
BRF2Q9HAW0 AC104692.2-201ENST00000603054 253 ntBASIC16■□□□□ 0.15
BRF2Q9HAW0 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16■□□□□ 0.15
BRF2Q9HAW0 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16■□□□□ 0.15
BRF2Q9HAW0 AC004790.2-201ENST00000623588 572 ntBASIC16■□□□□ 0.15
BRF2Q9HAW0 AC117500.6-201ENST00000624871 588 ntBASIC16■□□□□ 0.15
BRF2Q9HAW0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16■□□□□ 0.15
BRF2Q9HAW0 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16■□□□□ 0.15
BRF2Q9HAW0 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
BRF2Q9HAW0 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16■□□□□ 0.15
BRF2Q9HAW0 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16■□□□□ 0.15
BRF2Q9HAW0 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16■□□□□ 0.15
BRF2Q9HAW0 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16■□□□□ 0.15
BRF2Q9HAW0 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BRF2Q9HAW0 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BRF2Q9HAW0 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16■□□□□ 0.15
BRF2Q9HAW0 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
BRF2Q9HAW0 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BRF2Q9HAW0 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16■□□□□ 0.15
BRF2Q9HAW0 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 AL513523.2-202ENST00000427283 2040 ntBASIC15.99■□□□□ 0.15
BRF2Q9HAW0 AC026691.1-201ENST00000602502 2017 ntBASIC15.99■□□□□ 0.15
BRF2Q9HAW0 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 AL031284.1-201ENST00000419297 478 ntBASIC15.99■□□□□ 0.15
BRF2Q9HAW0 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 AL160237.2-201ENST00000556165 472 ntBASIC15.99■□□□□ 0.15
BRF2Q9HAW0 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 LINC01144-201ENST00000626198 1710 ntBASIC15.99■□□□□ 0.15
BRF2Q9HAW0 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.99■□□□□ 0.15
BRF2Q9HAW0 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 AC012569.1-201ENST00000591191 1524 ntBASIC15.99■□□□□ 0.15
BRF2Q9HAW0 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
BRF2Q9HAW0 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 AL662844.4-201ENST00000606367 2838 ntBASIC15.98■□□□□ 0.15
BRF2Q9HAW0 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
BRF2Q9HAW0 FAM185BP-201ENST00000443595 716 ntBASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms