Protein–RNA interactions for Protein: Q9BY10

SLC46A2, Thymic stromal cotransporter homolog, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A2Q9BY10 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC46A2Q9BY10 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC46A2Q9BY10 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC46A2Q9BY10 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC46A2Q9BY10 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC46A2Q9BY10 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC46A2Q9BY10 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC46A2Q9BY10 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC46A2Q9BY10 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC46A2Q9BY10 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC46A2Q9BY10 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SLC46A2Q9BY10 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC46A2Q9BY10 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
SLC46A2Q9BY10 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC46A2Q9BY10 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC46A2Q9BY10 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
SLC46A2Q9BY10 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SLC46A2Q9BY10 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC46A2Q9BY10 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC46A2Q9BY10 AC060834.1-201ENST00000443027 2032 ntBASIC17.13■□□□□ 0.33
SLC46A2Q9BY10 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC46A2Q9BY10 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC46A2Q9BY10 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC46A2Q9BY10 HLA-V-204ENST00000476601 1289 ntBASIC17.13■□□□□ 0.33
SLC46A2Q9BY10 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC46A2Q9BY10 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC46A2Q9BY10 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC46A2Q9BY10 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC46A2Q9BY10 AC239800.4-201ENST00000603712 296 ntBASIC17.13■□□□□ 0.33
SLC46A2Q9BY10 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC46A2Q9BY10 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC46A2Q9BY10 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC46A2Q9BY10 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SLC46A2Q9BY10 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SLC46A2Q9BY10 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SLC46A2Q9BY10 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC46A2Q9BY10 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC46A2Q9BY10 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC46A2Q9BY10 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC46A2Q9BY10 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC46A2Q9BY10 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC46A2Q9BY10 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC46A2Q9BY10 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.12■□□□□ 0.33
SLC46A2Q9BY10 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC46A2Q9BY10 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC46A2Q9BY10 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SLC46A2Q9BY10 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.12■□□□□ 0.33
SLC46A2Q9BY10 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC46A2Q9BY10 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
SLC46A2Q9BY10 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC46A2Q9BY10 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SLC46A2Q9BY10 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC46A2Q9BY10 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC46A2Q9BY10 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC46A2Q9BY10 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC46A2Q9BY10 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC46A2Q9BY10 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC46A2Q9BY10 AL353705.2-201ENST00000428243 662 ntBASIC17.12■□□□□ 0.33
SLC46A2Q9BY10 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.12■□□□□ 0.33
SLC46A2Q9BY10 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC46A2Q9BY10 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.12■□□□□ 0.33
SLC46A2Q9BY10 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.12■□□□□ 0.33
SLC46A2Q9BY10 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.12■□□□□ 0.33
SLC46A2Q9BY10 SERBP1P5-201ENST00000510079 1181 ntBASIC17.12■□□□□ 0.33
SLC46A2Q9BY10 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC46A2Q9BY10 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC46A2Q9BY10 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
SLC46A2Q9BY10 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC46A2Q9BY10 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC46A2Q9BY10 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SLC46A2Q9BY10 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SLC46A2Q9BY10 AL035456.1-201ENST00000456064 1369 ntBASIC17.12■□□□□ 0.33
SLC46A2Q9BY10 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC46A2Q9BY10 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC46A2Q9BY10 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC46A2Q9BY10 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
SLC46A2Q9BY10 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC46A2Q9BY10 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC46A2Q9BY10 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC46A2Q9BY10 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC46A2Q9BY10 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC46A2Q9BY10 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC46A2Q9BY10 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC46A2Q9BY10 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC46A2Q9BY10 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC46A2Q9BY10 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC46A2Q9BY10 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC46A2Q9BY10 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC46A2Q9BY10 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.11■□□□□ 0.33
SLC46A2Q9BY10 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC46A2Q9BY10 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.11■□□□□ 0.33
SLC46A2Q9BY10 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC46A2Q9BY10 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.11■□□□□ 0.33
SLC46A2Q9BY10 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC46A2Q9BY10 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.11■□□□□ 0.33
SLC46A2Q9BY10 RNA5SP410-201ENST00000516285 106 ntBASIC17.11■□□□□ 0.33
SLC46A2Q9BY10 AP002490.2-201ENST00000524791 560 ntBASIC17.11■□□□□ 0.33
SLC46A2Q9BY10 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC46A2Q9BY10 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC46A2Q9BY10 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms