Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.05■□□□□ -0
USB1Q9BQ65 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
USB1Q9BQ65 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.05■□□□□ -0
USB1Q9BQ65 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.05■□□□□ -0
USB1Q9BQ65 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
USB1Q9BQ65 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
USB1Q9BQ65 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.05■□□□□ -0
USB1Q9BQ65 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.05■□□□□ -0
USB1Q9BQ65 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
USB1Q9BQ65 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.05■□□□□ -0
USB1Q9BQ65 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
USB1Q9BQ65 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
USB1Q9BQ65 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
USB1Q9BQ65 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
USB1Q9BQ65 AC016396.2-201ENST00000562575 1417 ntBASIC15.05■□□□□ -0
USB1Q9BQ65 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
USB1Q9BQ65 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
USB1Q9BQ65 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
USB1Q9BQ65 PI4KAP1-204ENST00000612579 1703 ntBASIC15.05■□□□□ -0
USB1Q9BQ65 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.05■□□□□ -0
USB1Q9BQ65 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
USB1Q9BQ65 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.05■□□□□ -0
USB1Q9BQ65 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.05■□□□□ -0
USB1Q9BQ65 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.05■□□□□ -0
USB1Q9BQ65 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
USB1Q9BQ65 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.05■□□□□ -0
USB1Q9BQ65 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
USB1Q9BQ65 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.05■□□□□ -0
USB1Q9BQ65 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
USB1Q9BQ65 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
USB1Q9BQ65 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
USB1Q9BQ65 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC15.04■□□□□ -0
USB1Q9BQ65 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.04■□□□□ -0
USB1Q9BQ65 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.04■□□□□ -0
USB1Q9BQ65 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.04■□□□□ -0
USB1Q9BQ65 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.04■□□□□ -0
USB1Q9BQ65 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.04■□□□□ -0
USB1Q9BQ65 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.04■□□□□ -0
USB1Q9BQ65 AC129492.6-201ENST00000611383 1305 ntBASIC15.04■□□□□ -0
USB1Q9BQ65 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
USB1Q9BQ65 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.04■□□□□ -0
USB1Q9BQ65 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.04■□□□□ -0
USB1Q9BQ65 AC092865.5-201ENST00000545435 363 ntBASIC15.04■□□□□ -0
USB1Q9BQ65 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.04■□□□□ -0
USB1Q9BQ65 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.04■□□□□ -0
USB1Q9BQ65 AC096734.2-201ENST00000562054 433 ntBASIC15.04■□□□□ -0
USB1Q9BQ65 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.04■□□□□ -0
USB1Q9BQ65 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
USB1Q9BQ65 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.04■□□□□ -0
USB1Q9BQ65 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.04■□□□□ -0
USB1Q9BQ65 AL133445.2-201ENST00000611191 527 ntBASIC15.04■□□□□ -0
USB1Q9BQ65 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.04■□□□□ -0
USB1Q9BQ65 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.04■□□□□ -0
USB1Q9BQ65 AC008267.7-201ENST00000624570 1194 ntBASIC15.04■□□□□ -0
USB1Q9BQ65 AC007064.4-201ENST00000637740 555 ntBASIC15.04■□□□□ -0
USB1Q9BQ65 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.04■□□□□ -0
USB1Q9BQ65 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
USB1Q9BQ65 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.04■□□□□ -0
USB1Q9BQ65 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
USB1Q9BQ65 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.04■□□□□ -0
USB1Q9BQ65 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
USB1Q9BQ65 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
USB1Q9BQ65 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
USB1Q9BQ65 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.04■□□□□ -0
USB1Q9BQ65 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
USB1Q9BQ65 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.04■□□□□ -0
USB1Q9BQ65 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
USB1Q9BQ65 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.04■□□□□ -0
USB1Q9BQ65 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.04■□□□□ -0
USB1Q9BQ65 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
USB1Q9BQ65 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.03■□□□□ -0
USB1Q9BQ65 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.03■□□□□ -0
USB1Q9BQ65 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
USB1Q9BQ65 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.03■□□□□ -0
USB1Q9BQ65 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
USB1Q9BQ65 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.03■□□□□ -0
USB1Q9BQ65 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.03■□□□□ -0
USB1Q9BQ65 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
USB1Q9BQ65 UBALD1-205ENST00000590891 2641 ntBASIC15.03■□□□□ -0
USB1Q9BQ65 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
USB1Q9BQ65 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
USB1Q9BQ65 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
USB1Q9BQ65 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.03■□□□□ -0
USB1Q9BQ65 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.03■□□□□ -0
USB1Q9BQ65 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.03■□□□□ -0
USB1Q9BQ65 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
USB1Q9BQ65 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.03■□□□□ -0
USB1Q9BQ65 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.03■□□□□ -0
USB1Q9BQ65 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
USB1Q9BQ65 HCG4B-203ENST00000450128 991 ntBASIC15.03■□□□□ -0
USB1Q9BQ65 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
USB1Q9BQ65 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
USB1Q9BQ65 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.03■□□□□ -0
USB1Q9BQ65 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
USB1Q9BQ65 AC004790.2-201ENST00000623588 572 ntBASIC15.03■□□□□ -0
USB1Q9BQ65 LINC02228-204ENST00000642115 2962 ntBASIC15.03■□□□□ -0
USB1Q9BQ65 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.03■□□□□ -0
USB1Q9BQ65 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.03■□□□□ -0
USB1Q9BQ65 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.03■□□□□ -0
USB1Q9BQ65 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms