Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC12.76□□□□□ -0.37
VGLL1Q99990 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VGLL1Q99990 KRT18P1-202ENST00000452408 1331 ntBASIC12.76□□□□□ -0.37
VGLL1Q99990 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VGLL1Q99990 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC12.76□□□□□ -0.37
VGLL1Q99990 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VGLL1Q99990 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
VGLL1Q99990 AC233702.3-201ENST00000578656 1387 ntBASIC12.76□□□□□ -0.37
VGLL1Q99990 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
VGLL1Q99990 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VGLL1Q99990 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
VGLL1Q99990 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC12.76□□□□□ -0.37
VGLL1Q99990 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
VGLL1Q99990 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC12.76□□□□□ -0.37
VGLL1Q99990 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
VGLL1Q99990 INTS4P1-201ENST00000438455 1935 ntBASIC12.76□□□□□ -0.37
VGLL1Q99990 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VGLL1Q99990 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
VGLL1Q99990 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
VGLL1Q99990 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
VGLL1Q99990 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
VGLL1Q99990 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VGLL1Q99990 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VGLL1Q99990 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VGLL1Q99990 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC12.76□□□□□ -0.37
VGLL1Q99990 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
VGLL1Q99990 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
VGLL1Q99990 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VGLL1Q99990 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC12.75□□□□□ -0.37
VGLL1Q99990 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VGLL1Q99990 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VGLL1Q99990 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VGLL1Q99990 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VGLL1Q99990 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
VGLL1Q99990 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VGLL1Q99990 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC12.75□□□□□ -0.37
VGLL1Q99990 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
VGLL1Q99990 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VGLL1Q99990 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VGLL1Q99990 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VGLL1Q99990 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC12.75□□□□□ -0.37
VGLL1Q99990 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VGLL1Q99990 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
VGLL1Q99990 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
VGLL1Q99990 AL020989.1-201ENST00000422979 469 ntBASIC12.75□□□□□ -0.37
VGLL1Q99990 ACTG1P4-201ENST00000425123 1122 ntBASIC12.75□□□□□ -0.37
VGLL1Q99990 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC12.75□□□□□ -0.37
VGLL1Q99990 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC12.75□□□□□ -0.37
VGLL1Q99990 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC12.75□□□□□ -0.37
VGLL1Q99990 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC12.75□□□□□ -0.37
VGLL1Q99990 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC12.75□□□□□ -0.37
VGLL1Q99990 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VGLL1Q99990 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
VGLL1Q99990 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC12.75□□□□□ -0.37
VGLL1Q99990 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC12.75□□□□□ -0.37
VGLL1Q99990 DUX4L17-201ENST00000557360 1267 ntBASIC12.75□□□□□ -0.37
VGLL1Q99990 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC12.75□□□□□ -0.37
VGLL1Q99990 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC12.75□□□□□ -0.37
VGLL1Q99990 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
VGLL1Q99990 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VGLL1Q99990 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
VGLL1Q99990 AC007950.2-201ENST00000615045 2347 ntBASIC12.75□□□□□ -0.37
VGLL1Q99990 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC12.75□□□□□ -0.37
VGLL1Q99990 PAUPAR-201ENST00000630360 2965 ntBASIC12.75□□□□□ -0.37
VGLL1Q99990 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
VGLL1Q99990 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VGLL1Q99990 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
VGLL1Q99990 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC12.75□□□□□ -0.37
VGLL1Q99990 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC12.75□□□□□ -0.37
VGLL1Q99990 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
VGLL1Q99990 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VGLL1Q99990 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC12.74□□□□□ -0.37
VGLL1Q99990 C1R-202ENST00000536053 2347 ntTSL 2 BASIC12.74□□□□□ -0.37
VGLL1Q99990 BID-213ENST00000615414 2236 ntTSL 5 BASIC12.74□□□□□ -0.37
VGLL1Q99990 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC12.74□□□□□ -0.37
VGLL1Q99990 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC12.74□□□□□ -0.37
VGLL1Q99990 AC097637.2-201ENST00000624096 1997 ntBASIC12.74□□□□□ -0.37
VGLL1Q99990 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VGLL1Q99990 PC-204ENST00000524491 1714 ntTSL 2 BASIC12.74□□□□□ -0.37
VGLL1Q99990 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VGLL1Q99990 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
VGLL1Q99990 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VGLL1Q99990 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VGLL1Q99990 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
VGLL1Q99990 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
VGLL1Q99990 AL021920.2-201ENST00000624828 1351 ntBASIC12.74□□□□□ -0.37
VGLL1Q99990 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VGLL1Q99990 AC005332.1-201ENST00000577698 1310 ntBASIC12.74□□□□□ -0.37
VGLL1Q99990 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.74□□□□□ -0.37
VGLL1Q99990 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VGLL1Q99990 FUOM-202ENST00000368551 628 ntTSL 3 BASIC12.74□□□□□ -0.37
VGLL1Q99990 RCN1P2-201ENST00000398357 915 ntBASIC12.74□□□□□ -0.37
VGLL1Q99990 AL031133.1-201ENST00000406807 723 ntBASIC12.74□□□□□ -0.37
VGLL1Q99990 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
VGLL1Q99990 PTK2-216ENST00000519881 863 ntTSL 3 BASIC12.74□□□□□ -0.37
VGLL1Q99990 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC12.74□□□□□ -0.37
VGLL1Q99990 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC12.74□□□□□ -0.37
VGLL1Q99990 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC12.74□□□□□ -0.37
VGLL1Q99990 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC12.74□□□□□ -0.37
VGLL1Q99990 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms