Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.87□□□□□ -0.03
VRK1Q99986 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.87□□□□□ -0.03
VRK1Q99986 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.87□□□□□ -0.03
VRK1Q99986 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.87□□□□□ -0.03
VRK1Q99986 UNC93B6-202ENST00000528242 690 ntBASIC14.87□□□□□ -0.03
VRK1Q99986 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.87□□□□□ -0.03
VRK1Q99986 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.87□□□□□ -0.03
VRK1Q99986 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.87□□□□□ -0.03
VRK1Q99986 AC145285.3-201ENST00000564603 959 ntBASIC14.87□□□□□ -0.03
VRK1Q99986 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.87□□□□□ -0.03
VRK1Q99986 AC019129.2-201ENST00000609837 1235 ntBASIC14.87□□□□□ -0.03
VRK1Q99986 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
VRK1Q99986 AL589182.2-201ENST00000619332 1049 ntBASIC14.87□□□□□ -0.03
VRK1Q99986 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.87□□□□□ -0.03
VRK1Q99986 PGM5P2-202ENST00000637225 1043 ntBASIC14.87□□□□□ -0.03
VRK1Q99986 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.87□□□□□ -0.03
VRK1Q99986 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
VRK1Q99986 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
VRK1Q99986 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
VRK1Q99986 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
VRK1Q99986 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK1Q99986 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
VRK1Q99986 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK1Q99986 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK1Q99986 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.87□□□□□ -0.03
VRK1Q99986 AC148477.5-201ENST00000625164 1645 ntBASIC14.87□□□□□ -0.03
VRK1Q99986 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
VRK1Q99986 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VRK1Q99986 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK1Q99986 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK1Q99986 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.87□□□□□ -0.03
VRK1Q99986 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.87□□□□□ -0.03
VRK1Q99986 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK1Q99986 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
VRK1Q99986 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK1Q99986 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK1Q99986 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VRK1Q99986 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
VRK1Q99986 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VRK1Q99986 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
VRK1Q99986 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.86□□□□□ -0.03
VRK1Q99986 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VRK1Q99986 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
VRK1Q99986 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VRK1Q99986 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VRK1Q99986 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VRK1Q99986 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.86□□□□□ -0.03
VRK1Q99986 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VRK1Q99986 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VRK1Q99986 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
VRK1Q99986 NCF1C-201ENST00000438382 1427 ntBASIC14.86□□□□□ -0.03
VRK1Q99986 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
VRK1Q99986 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
VRK1Q99986 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VRK1Q99986 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VRK1Q99986 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VRK1Q99986 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VRK1Q99986 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.86□□□□□ -0.03
VRK1Q99986 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
VRK1Q99986 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.86□□□□□ -0.03
VRK1Q99986 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
VRK1Q99986 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.86□□□□□ -0.03
VRK1Q99986 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.86□□□□□ -0.03
VRK1Q99986 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.86□□□□□ -0.03
VRK1Q99986 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.86□□□□□ -0.03
VRK1Q99986 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
VRK1Q99986 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.86□□□□□ -0.03
VRK1Q99986 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VRK1Q99986 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
VRK1Q99986 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VRK1Q99986 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
VRK1Q99986 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.86□□□□□ -0.03
VRK1Q99986 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VRK1Q99986 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.86□□□□□ -0.03
VRK1Q99986 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.86□□□□□ -0.03
VRK1Q99986 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.86□□□□□ -0.03
VRK1Q99986 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VRK1Q99986 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
VRK1Q99986 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
VRK1Q99986 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VRK1Q99986 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
VRK1Q99986 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VRK1Q99986 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VRK1Q99986 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VRK1Q99986 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VRK1Q99986 AL603756.1-201ENST00000606511 2163 ntBASIC14.85□□□□□ -0.03
VRK1Q99986 PCDHB17P-201ENST00000539533 2393 ntBASIC14.85□□□□□ -0.03
VRK1Q99986 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
VRK1Q99986 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VRK1Q99986 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
VRK1Q99986 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VRK1Q99986 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VRK1Q99986 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.85□□□□□ -0.03
VRK1Q99986 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VRK1Q99986 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VRK1Q99986 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VRK1Q99986 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.85□□□□□ -0.03
VRK1Q99986 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VRK1Q99986 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VRK1Q99986 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms