Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 MIR661-201ENST00000384842 89 ntBASIC20.7■□□□□ 0.9
CCDC85AQ96PX6 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC85AQ96PX6 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC85AQ96PX6 SPDYE7P-202ENST00000420373 878 ntBASIC20.7■□□□□ 0.9
CCDC85AQ96PX6 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC20.7■□□□□ 0.9
CCDC85AQ96PX6 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC85AQ96PX6 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC85AQ96PX6 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC20.7■□□□□ 0.9
CCDC85AQ96PX6 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC20.7■□□□□ 0.9
CCDC85AQ96PX6 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC85AQ96PX6 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CCDC85AQ96PX6 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
CCDC85AQ96PX6 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC20.7■□□□□ 0.9
CCDC85AQ96PX6 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC85AQ96PX6 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CCDC85AQ96PX6 AC138761.1-201ENST00000584393 385 ntBASIC20.7■□□□□ 0.9
CCDC85AQ96PX6 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC20.7■□□□□ 0.9
CCDC85AQ96PX6 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC85AQ96PX6 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC85AQ96PX6 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC85AQ96PX6 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC85AQ96PX6 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC85AQ96PX6 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC85AQ96PX6 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CCDC85AQ96PX6 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC85AQ96PX6 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CCDC85AQ96PX6 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC85AQ96PX6 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC85AQ96PX6 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC85AQ96PX6 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC85AQ96PX6 FOXO1B-201ENST00000504678 1527 ntBASIC20.69■□□□□ 0.9
CCDC85AQ96PX6 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC85AQ96PX6 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC85AQ96PX6 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC85AQ96PX6 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC85AQ96PX6 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC85AQ96PX6 BASP1P1-201ENST00000430708 665 ntBASIC20.69■□□□□ 0.9
CCDC85AQ96PX6 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC85AQ96PX6 KRT18P34-201ENST00000488218 1270 ntBASIC20.69■□□□□ 0.9
CCDC85AQ96PX6 AC140878.1-201ENST00000565277 250 ntBASIC20.69■□□□□ 0.9
CCDC85AQ96PX6 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC85AQ96PX6 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC85AQ96PX6 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CCDC85AQ96PX6 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CCDC85AQ96PX6 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC85AQ96PX6 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
CCDC85AQ96PX6 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC85AQ96PX6 TUBB8P12-201ENST00000308911 1335 ntBASIC20.69■□□□□ 0.9
CCDC85AQ96PX6 TUBB7P-202ENST00000428444 1305 ntBASIC20.69■□□□□ 0.9
CCDC85AQ96PX6 TUBB8P7-204ENST00000567960 1332 ntBASIC20.69■□□□□ 0.9
CCDC85AQ96PX6 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CCDC85AQ96PX6 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC85AQ96PX6 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC85AQ96PX6 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC85AQ96PX6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC85AQ96PX6 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC85AQ96PX6 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC85AQ96PX6 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC85AQ96PX6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC85AQ96PX6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC85AQ96PX6 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC85AQ96PX6 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CCDC85AQ96PX6 AP3S2-216ENST00000617003 1561 ntBASIC20.68■□□□□ 0.9
CCDC85AQ96PX6 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CCDC85AQ96PX6 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC85AQ96PX6 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC85AQ96PX6 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
CCDC85AQ96PX6 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC85AQ96PX6 AC236430.1-201ENST00000402231 743 ntBASIC20.68■□□□□ 0.9
CCDC85AQ96PX6 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CCDC85AQ96PX6 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC85AQ96PX6 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
CCDC85AQ96PX6 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC85AQ96PX6 AC097493.3-201ENST00000509725 367 ntBASIC20.68■□□□□ 0.9
CCDC85AQ96PX6 RNA5SP421-201ENST00000516864 134 ntBASIC20.68■□□□□ 0.9
CCDC85AQ96PX6 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC85AQ96PX6 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC85AQ96PX6 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC85AQ96PX6 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CCDC85AQ96PX6 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC85AQ96PX6 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC85AQ96PX6 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC85AQ96PX6 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC85AQ96PX6 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC85AQ96PX6 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CCDC85AQ96PX6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC85AQ96PX6 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CCDC85AQ96PX6 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC85AQ96PX6 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC85AQ96PX6 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CCDC85AQ96PX6 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC85AQ96PX6 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC85AQ96PX6 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CCDC85AQ96PX6 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC85AQ96PX6 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
CCDC85AQ96PX6 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC85AQ96PX6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC85AQ96PX6 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC85AQ96PX6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC85AQ96PX6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms