Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 MIR4492-201ENST00000581627 80 ntBASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 CYP2A7P1-201ENST00000595391 815 ntBASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 AC073389.1-201ENST00000595595 795 ntBASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SYNGAP1Q96PV0 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.94■□□□□ 0.62
SYNGAP1Q96PV0 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNGAP1Q96PV0 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNGAP1Q96PV0 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.94■□□□□ 0.62
SYNGAP1Q96PV0 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNGAP1Q96PV0 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNGAP1Q96PV0 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SYNGAP1Q96PV0 AC108860.2-201ENST00000562760 2183 ntBASIC18.94■□□□□ 0.62
SYNGAP1Q96PV0 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.94■□□□□ 0.62
SYNGAP1Q96PV0 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNGAP1Q96PV0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SYNGAP1Q96PV0 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SYNGAP1Q96PV0 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.94■□□□□ 0.62
SYNGAP1Q96PV0 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.94■□□□□ 0.62
SYNGAP1Q96PV0 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SYNGAP1Q96PV0 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNGAP1Q96PV0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNGAP1Q96PV0 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.94■□□□□ 0.62
SYNGAP1Q96PV0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.94■□□□□ 0.62
SYNGAP1Q96PV0 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.94■□□□□ 0.62
SYNGAP1Q96PV0 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNGAP1Q96PV0 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SYNGAP1Q96PV0 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SYNGAP1Q96PV0 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.94■□□□□ 0.62
SYNGAP1Q96PV0 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.94■□□□□ 0.62
SYNGAP1Q96PV0 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SYNGAP1Q96PV0 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.94■□□□□ 0.62
SYNGAP1Q96PV0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.94■□□□□ 0.62
SYNGAP1Q96PV0 AC241585.1-201ENST00000433527 519 ntBASIC18.94■□□□□ 0.62
SYNGAP1Q96PV0 AC004890.2-204ENST00000481968 304 ntBASIC18.94■□□□□ 0.62
SYNGAP1Q96PV0 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.94■□□□□ 0.62
SYNGAP1Q96PV0 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.94■□□□□ 0.62
SYNGAP1Q96PV0 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.94■□□□□ 0.62
SYNGAP1Q96PV0 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.94■□□□□ 0.62
SYNGAP1Q96PV0 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SYNGAP1Q96PV0 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNGAP1Q96PV0 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SYNGAP1Q96PV0 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
SYNGAP1Q96PV0 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SYNGAP1Q96PV0 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNGAP1Q96PV0 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SYNGAP1Q96PV0 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SYNGAP1Q96PV0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNGAP1Q96PV0 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.93■□□□□ 0.62
SYNGAP1Q96PV0 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNGAP1Q96PV0 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNGAP1Q96PV0 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
SYNGAP1Q96PV0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNGAP1Q96PV0 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNGAP1Q96PV0 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SYNGAP1Q96PV0 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.93■□□□□ 0.62
SYNGAP1Q96PV0 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.93■□□□□ 0.62
SYNGAP1Q96PV0 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SYNGAP1Q96PV0 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.93■□□□□ 0.62
SYNGAP1Q96PV0 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SYNGAP1Q96PV0 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.93■□□□□ 0.62
SYNGAP1Q96PV0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
SYNGAP1Q96PV0 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNGAP1Q96PV0 AC141586.5-201ENST00000624546 2050 ntBASIC18.93■□□□□ 0.62
SYNGAP1Q96PV0 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.93■□□□□ 0.62
SYNGAP1Q96PV0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.93■□□□□ 0.62
SYNGAP1Q96PV0 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.93■□□□□ 0.62
SYNGAP1Q96PV0 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SYNGAP1Q96PV0 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SYNGAP1Q96PV0 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNGAP1Q96PV0 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SYNGAP1Q96PV0 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNGAP1Q96PV0 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.92■□□□□ 0.62
SYNGAP1Q96PV0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
SYNGAP1Q96PV0 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.92■□□□□ 0.62
SYNGAP1Q96PV0 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNGAP1Q96PV0 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SYNGAP1Q96PV0 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNGAP1Q96PV0 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.92■□□□□ 0.62
SYNGAP1Q96PV0 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.92■□□□□ 0.62
SYNGAP1Q96PV0 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNGAP1Q96PV0 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNGAP1Q96PV0 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNGAP1Q96PV0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNGAP1Q96PV0 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNGAP1Q96PV0 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SYNGAP1Q96PV0 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNGAP1Q96PV0 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.92■□□□□ 0.62
SYNGAP1Q96PV0 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.92■□□□□ 0.62
SYNGAP1Q96PV0 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.92■□□□□ 0.62
SYNGAP1Q96PV0 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.92■□□□□ 0.62
SYNGAP1Q96PV0 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.92■□□□□ 0.62
SYNGAP1Q96PV0 RARRES2P9-201ENST00000565168 469 ntBASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms