Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CALR3Q96L12 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CALR3Q96L12 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.74■□□□□ 0.43
CALR3Q96L12 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CALR3Q96L12 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CALR3Q96L12 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.74■□□□□ 0.43
CALR3Q96L12 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CALR3Q96L12 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.74■□□□□ 0.43
CALR3Q96L12 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
CALR3Q96L12 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CALR3Q96L12 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CALR3Q96L12 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.74■□□□□ 0.43
CALR3Q96L12 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CALR3Q96L12 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CALR3Q96L12 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CALR3Q96L12 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CALR3Q96L12 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CALR3Q96L12 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CALR3Q96L12 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CALR3Q96L12 NUS1P2-201ENST00000417358 873 ntBASIC17.74■□□□□ 0.43
CALR3Q96L12 AC132008.2-207ENST00000454517 770 ntBASIC17.74■□□□□ 0.43
CALR3Q96L12 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CALR3Q96L12 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CALR3Q96L12 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CALR3Q96L12 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.74■□□□□ 0.43
CALR3Q96L12 AP001269.4-201ENST00000609611 512 ntBASIC17.74■□□□□ 0.43
CALR3Q96L12 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.74■□□□□ 0.43
CALR3Q96L12 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CALR3Q96L12 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CALR3Q96L12 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CALR3Q96L12 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.74■□□□□ 0.43
CALR3Q96L12 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CALR3Q96L12 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CALR3Q96L12 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.74■□□□□ 0.43
CALR3Q96L12 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.74■□□□□ 0.43
CALR3Q96L12 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.74■□□□□ 0.43
CALR3Q96L12 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CALR3Q96L12 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CALR3Q96L12 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.74■□□□□ 0.43
CALR3Q96L12 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CALR3Q96L12 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CALR3Q96L12 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.74■□□□□ 0.43
CALR3Q96L12 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
CALR3Q96L12 SNX33P1-201ENST00000592116 1762 ntBASIC17.74■□□□□ 0.43
CALR3Q96L12 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CALR3Q96L12 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CALR3Q96L12 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CALR3Q96L12 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CALR3Q96L12 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CALR3Q96L12 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CALR3Q96L12 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.73■□□□□ 0.43
CALR3Q96L12 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.73■□□□□ 0.43
CALR3Q96L12 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CALR3Q96L12 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CALR3Q96L12 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CALR3Q96L12 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CALR3Q96L12 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.73■□□□□ 0.43
CALR3Q96L12 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.73■□□□□ 0.43
CALR3Q96L12 AC139887.3-201ENST00000568585 713 ntBASIC17.73■□□□□ 0.43
CALR3Q96L12 AC064862.7-201ENST00000604520 867 ntBASIC17.73■□□□□ 0.43
CALR3Q96L12 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.73■□□□□ 0.43
CALR3Q96L12 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CALR3Q96L12 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CALR3Q96L12 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CALR3Q96L12 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CALR3Q96L12 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CALR3Q96L12 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CALR3Q96L12 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.73■□□□□ 0.43
CALR3Q96L12 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CALR3Q96L12 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.73■□□□□ 0.43
CALR3Q96L12 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.73■□□□□ 0.43
CALR3Q96L12 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CALR3Q96L12 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CALR3Q96L12 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CALR3Q96L12 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CALR3Q96L12 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CALR3Q96L12 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.72■□□□□ 0.43
CALR3Q96L12 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CALR3Q96L12 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.72■□□□□ 0.43
CALR3Q96L12 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CALR3Q96L12 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CALR3Q96L12 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CALR3Q96L12 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
CALR3Q96L12 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CALR3Q96L12 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.72■□□□□ 0.43
CALR3Q96L12 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CALR3Q96L12 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.72■□□□□ 0.43
CALR3Q96L12 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.72■□□□□ 0.43
CALR3Q96L12 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CALR3Q96L12 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CALR3Q96L12 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CALR3Q96L12 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.72■□□□□ 0.43
CALR3Q96L12 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.72■□□□□ 0.43
CALR3Q96L12 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.72■□□□□ 0.43
CALR3Q96L12 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CALR3Q96L12 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CALR3Q96L12 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.72■□□□□ 0.43
CALR3Q96L12 BX005266.1-201ENST00000473402 457 ntBASIC17.72■□□□□ 0.43
CALR3Q96L12 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CALR3Q96L12 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms