Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.75■□□□□ 0.27
SHDQ96IW2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.75■□□□□ 0.27
SHDQ96IW2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHDQ96IW2 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.75■□□□□ 0.27
SHDQ96IW2 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHDQ96IW2 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHDQ96IW2 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SHDQ96IW2 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.75■□□□□ 0.27
SHDQ96IW2 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.75■□□□□ 0.27
SHDQ96IW2 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SHDQ96IW2 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SHDQ96IW2 AC007389.4-201ENST00000454674 793 ntBASIC16.75■□□□□ 0.27
SHDQ96IW2 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
SHDQ96IW2 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.75■□□□□ 0.27
SHDQ96IW2 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.75■□□□□ 0.27
SHDQ96IW2 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.75■□□□□ 0.27
SHDQ96IW2 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SHDQ96IW2 AL512343.1-201ENST00000605837 169 ntBASIC16.75■□□□□ 0.27
SHDQ96IW2 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.75■□□□□ 0.27
SHDQ96IW2 AC133552.6-201ENST00000613406 534 ntBASIC16.75■□□□□ 0.27
SHDQ96IW2 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SHDQ96IW2 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.75■□□□□ 0.27
SHDQ96IW2 AL033527.5-202ENST00000641632 1098 ntBASIC16.75■□□□□ 0.27
SHDQ96IW2 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SHDQ96IW2 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHDQ96IW2 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SHDQ96IW2 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
SHDQ96IW2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SHDQ96IW2 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.75■□□□□ 0.27
SHDQ96IW2 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SHDQ96IW2 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SHDQ96IW2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SHDQ96IW2 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SHDQ96IW2 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHDQ96IW2 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHDQ96IW2 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.74■□□□□ 0.27
SHDQ96IW2 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHDQ96IW2 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SHDQ96IW2 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.74■□□□□ 0.27
SHDQ96IW2 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.74■□□□□ 0.27
SHDQ96IW2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SHDQ96IW2 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.74■□□□□ 0.27
SHDQ96IW2 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SHDQ96IW2 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SHDQ96IW2 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHDQ96IW2 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SHDQ96IW2 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.74■□□□□ 0.27
SHDQ96IW2 BOLA2P3-201ENST00000404566 256 ntBASIC16.74■□□□□ 0.27
SHDQ96IW2 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SHDQ96IW2 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.74■□□□□ 0.27
SHDQ96IW2 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.74■□□□□ 0.27
SHDQ96IW2 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.74■□□□□ 0.27
SHDQ96IW2 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.74■□□□□ 0.27
SHDQ96IW2 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.74■□□□□ 0.27
SHDQ96IW2 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.74■□□□□ 0.27
SHDQ96IW2 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.74■□□□□ 0.27
SHDQ96IW2 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHDQ96IW2 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.74■□□□□ 0.27
SHDQ96IW2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
SHDQ96IW2 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SHDQ96IW2 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHDQ96IW2 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
SHDQ96IW2 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.74■□□□□ 0.27
SHDQ96IW2 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.74■□□□□ 0.27
SHDQ96IW2 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHDQ96IW2 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHDQ96IW2 AC108860.2-201ENST00000562760 2183 ntBASIC16.74■□□□□ 0.27
SHDQ96IW2 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SHDQ96IW2 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHDQ96IW2 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHDQ96IW2 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SHDQ96IW2 TUBB8P12-201ENST00000308911 1335 ntBASIC16.73■□□□□ 0.27
SHDQ96IW2 TUBB7P-202ENST00000428444 1305 ntBASIC16.73■□□□□ 0.27
SHDQ96IW2 TUBB8P7-204ENST00000567960 1332 ntBASIC16.73■□□□□ 0.27
SHDQ96IW2 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SHDQ96IW2 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.73■□□□□ 0.27
SHDQ96IW2 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SHDQ96IW2 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.73■□□□□ 0.27
SHDQ96IW2 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHDQ96IW2 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.73■□□□□ 0.27
SHDQ96IW2 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SHDQ96IW2 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHDQ96IW2 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHDQ96IW2 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHDQ96IW2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.73■□□□□ 0.27
SHDQ96IW2 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.73■□□□□ 0.27
SHDQ96IW2 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SHDQ96IW2 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.73■□□□□ 0.27
SHDQ96IW2 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.73■□□□□ 0.27
SHDQ96IW2 AC123567.1-201ENST00000548294 1261 ntBASIC16.73■□□□□ 0.27
SHDQ96IW2 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.73■□□□□ 0.27
SHDQ96IW2 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.73■□□□□ 0.27
SHDQ96IW2 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.73■□□□□ 0.27
SHDQ96IW2 MIR6069-201ENST00000620069 79 ntBASIC16.73■□□□□ 0.27
SHDQ96IW2 COX11-210ENST00000639671 696 ntBASIC16.73■□□□□ 0.27
SHDQ96IW2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHDQ96IW2 AC012317.2-201ENST00000623305 2251 ntBASIC16.73■□□□□ 0.27
SHDQ96IW2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SHDQ96IW2 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.73■□□□□ 0.27
SHDQ96IW2 KRT8P12-202ENST00000472924 1397 ntBASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms