Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.31■□□□□ 0.36
IFT43Q96FT9 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.31■□□□□ 0.36
IFT43Q96FT9 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFT43Q96FT9 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
IFT43Q96FT9 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFT43Q96FT9 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.31■□□□□ 0.36
IFT43Q96FT9 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFT43Q96FT9 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
IFT43Q96FT9 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.31■□□□□ 0.36
IFT43Q96FT9 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFT43Q96FT9 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFT43Q96FT9 FRMD8P1-201ENST00000440433 1524 ntBASIC17.31■□□□□ 0.36
IFT43Q96FT9 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
IFT43Q96FT9 FER1L4-210ENST00000615531 5998 ntBASIC17.31■□□□□ 0.36
IFT43Q96FT9 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFT43Q96FT9 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.31■□□□□ 0.36
IFT43Q96FT9 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFT43Q96FT9 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.31■□□□□ 0.36
IFT43Q96FT9 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IFT43Q96FT9 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.31■□□□□ 0.36
IFT43Q96FT9 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
IFT43Q96FT9 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IFT43Q96FT9 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
IFT43Q96FT9 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IFT43Q96FT9 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IFT43Q96FT9 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.3■□□□□ 0.36
IFT43Q96FT9 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
IFT43Q96FT9 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IFT43Q96FT9 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
IFT43Q96FT9 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
IFT43Q96FT9 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.3■□□□□ 0.36
IFT43Q96FT9 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IFT43Q96FT9 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
IFT43Q96FT9 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IFT43Q96FT9 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IFT43Q96FT9 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IFT43Q96FT9 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.3■□□□□ 0.36
IFT43Q96FT9 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.3■□□□□ 0.36
IFT43Q96FT9 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.3■□□□□ 0.36
IFT43Q96FT9 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.3■□□□□ 0.36
IFT43Q96FT9 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IFT43Q96FT9 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.3■□□□□ 0.36
IFT43Q96FT9 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.3■□□□□ 0.36
IFT43Q96FT9 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.3■□□□□ 0.36
IFT43Q96FT9 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.3■□□□□ 0.36
IFT43Q96FT9 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.3■□□□□ 0.36
IFT43Q96FT9 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.3■□□□□ 0.36
IFT43Q96FT9 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
IFT43Q96FT9 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
IFT43Q96FT9 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IFT43Q96FT9 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
IFT43Q96FT9 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IFT43Q96FT9 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IFT43Q96FT9 LINC02199-201ENST00000506655 2702 ntBASIC17.3■□□□□ 0.36
IFT43Q96FT9 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
IFT43Q96FT9 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IFT43Q96FT9 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.3■□□□□ 0.36
IFT43Q96FT9 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IFT43Q96FT9 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
IFT43Q96FT9 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
IFT43Q96FT9 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
IFT43Q96FT9 AC092068.3-201ENST00000587894 2016 ntBASIC17.3■□□□□ 0.36
IFT43Q96FT9 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
IFT43Q96FT9 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.3■□□□□ 0.36
IFT43Q96FT9 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
IFT43Q96FT9 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IFT43Q96FT9 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.29■□□□□ 0.36
IFT43Q96FT9 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.29■□□□□ 0.36
IFT43Q96FT9 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
IFT43Q96FT9 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IFT43Q96FT9 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.29■□□□□ 0.36
IFT43Q96FT9 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IFT43Q96FT9 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.29■□□□□ 0.36
IFT43Q96FT9 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IFT43Q96FT9 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.29■□□□□ 0.36
IFT43Q96FT9 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
IFT43Q96FT9 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
IFT43Q96FT9 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
IFT43Q96FT9 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IFT43Q96FT9 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IFT43Q96FT9 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
IFT43Q96FT9 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.29■□□□□ 0.36
IFT43Q96FT9 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.29■□□□□ 0.36
IFT43Q96FT9 DNAJB3-201ENST00000446806 729 ntBASIC17.29■□□□□ 0.36
IFT43Q96FT9 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.29■□□□□ 0.36
IFT43Q96FT9 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IFT43Q96FT9 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.29■□□□□ 0.36
IFT43Q96FT9 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.29■□□□□ 0.36
IFT43Q96FT9 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.29■□□□□ 0.36
IFT43Q96FT9 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.29■□□□□ 0.36
IFT43Q96FT9 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.29■□□□□ 0.36
IFT43Q96FT9 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.29■□□□□ 0.36
IFT43Q96FT9 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
IFT43Q96FT9 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IFT43Q96FT9 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
IFT43Q96FT9 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IFT43Q96FT9 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.29■□□□□ 0.36
IFT43Q96FT9 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IFT43Q96FT9 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IFT43Q96FT9 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms