Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RNF183Q96D59 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RNF183Q96D59 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RNF183Q96D59 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RNF183Q96D59 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RNF183Q96D59 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RNF183Q96D59 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RNF183Q96D59 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
RNF183Q96D59 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RNF183Q96D59 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RNF183Q96D59 FUK-207ENST00000571514 3054 ntTSL 2 BASIC12.48□□□□□ -0.41
RNF183Q96D59 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC12.48□□□□□ -0.41
RNF183Q96D59 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RNF183Q96D59 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RNF183Q96D59 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RNF183Q96D59 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC12.48□□□□□ -0.41
RNF183Q96D59 GPX1P2-201ENST00000429271 606 ntBASIC12.48□□□□□ -0.41
RNF183Q96D59 MAL2-202ENST00000531508 892 ntTSL 3 BASIC12.48□□□□□ -0.41
RNF183Q96D59 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
RNF183Q96D59 AC096734.2-201ENST00000562054 433 ntBASIC12.48□□□□□ -0.41
RNF183Q96D59 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.48□□□□□ -0.41
RNF183Q96D59 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.48□□□□□ -0.41
RNF183Q96D59 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
RNF183Q96D59 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC12.48□□□□□ -0.41
RNF183Q96D59 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC12.48□□□□□ -0.41
RNF183Q96D59 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
RNF183Q96D59 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RNF183Q96D59 AC007326.2-201ENST00000624224 7579 ntBASIC12.48□□□□□ -0.41
RNF183Q96D59 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC12.48□□□□□ -0.41
RNF183Q96D59 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC12.48□□□□□ -0.41
RNF183Q96D59 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RNF183Q96D59 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
RNF183Q96D59 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RNF183Q96D59 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RNF183Q96D59 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC12.48□□□□□ -0.41
RNF183Q96D59 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RNF183Q96D59 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RNF183Q96D59 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC12.48□□□□□ -0.41
RNF183Q96D59 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC12.48□□□□□ -0.41
RNF183Q96D59 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RNF183Q96D59 LINC02228-204ENST00000642115 2962 ntBASIC12.48□□□□□ -0.41
RNF183Q96D59 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
RNF183Q96D59 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
RNF183Q96D59 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RNF183Q96D59 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RNF183Q96D59 PXK-206ENST00000463280 2825 ntTSL 2 BASIC12.47□□□□□ -0.41
RNF183Q96D59 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
RNF183Q96D59 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC12.47□□□□□ -0.41
RNF183Q96D59 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RNF183Q96D59 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RNF183Q96D59 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RNF183Q96D59 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RNF183Q96D59 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RNF183Q96D59 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC12.47□□□□□ -0.41
RNF183Q96D59 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC12.47□□□□□ -0.41
RNF183Q96D59 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RNF183Q96D59 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RNF183Q96D59 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RNF183Q96D59 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
RNF183Q96D59 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC12.47□□□□□ -0.41
RNF183Q96D59 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RNF183Q96D59 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RNF183Q96D59 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
RNF183Q96D59 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
RNF183Q96D59 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
RNF183Q96D59 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
RNF183Q96D59 MCCD1P2-201ENST00000423228 335 ntBASIC12.47□□□□□ -0.41
RNF183Q96D59 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RNF183Q96D59 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC12.47□□□□□ -0.41
RNF183Q96D59 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
RNF183Q96D59 AC112482.1-201ENST00000492080 688 ntBASIC12.47□□□□□ -0.41
RNF183Q96D59 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC12.47□□□□□ -0.41
RNF183Q96D59 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RNF183Q96D59 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC12.47□□□□□ -0.41
RNF183Q96D59 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
RNF183Q96D59 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
RNF183Q96D59 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RNF183Q96D59 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC12.47□□□□□ -0.41
RNF183Q96D59 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RNF183Q96D59 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC12.47□□□□□ -0.41
RNF183Q96D59 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
RNF183Q96D59 AL023806.1-201ENST00000603994 1649 ntBASIC12.47□□□□□ -0.41
RNF183Q96D59 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RNF183Q96D59 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RNF183Q96D59 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RNF183Q96D59 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC12.47□□□□□ -0.41
RNF183Q96D59 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RNF183Q96D59 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC12.47□□□□□ -0.41
RNF183Q96D59 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
RNF183Q96D59 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
RNF183Q96D59 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
RNF183Q96D59 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.47□□□□□ -0.41
RNF183Q96D59 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC12.47□□□□□ -0.41
RNF183Q96D59 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RNF183Q96D59 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC12.47□□□□□ -0.41
RNF183Q96D59 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
RNF183Q96D59 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
RNF183Q96D59 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RNF183Q96D59 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC12.46□□□□□ -0.41
RNF183Q96D59 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms