Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
TRIM43Q96BQ3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.94■□□□□ 0.46
TRIM43Q96BQ3 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.94■□□□□ 0.46
TRIM43Q96BQ3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM43Q96BQ3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TRIM43Q96BQ3 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM43Q96BQ3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM43Q96BQ3 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM43Q96BQ3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TRIM43Q96BQ3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM43Q96BQ3 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.94■□□□□ 0.46
TRIM43Q96BQ3 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.94■□□□□ 0.46
TRIM43Q96BQ3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TRIM43Q96BQ3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.94■□□□□ 0.46
TRIM43Q96BQ3 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM43Q96BQ3 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.94■□□□□ 0.46
TRIM43Q96BQ3 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
TRIM43Q96BQ3 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.94■□□□□ 0.46
TRIM43Q96BQ3 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.94■□□□□ 0.46
TRIM43Q96BQ3 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM43Q96BQ3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM43Q96BQ3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM43Q96BQ3 AC016396.2-201ENST00000562575 1417 ntBASIC17.94■□□□□ 0.46
TRIM43Q96BQ3 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM43Q96BQ3 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
TRIM43Q96BQ3 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TRIM43Q96BQ3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM43Q96BQ3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM43Q96BQ3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRIM43Q96BQ3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM43Q96BQ3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM43Q96BQ3 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM43Q96BQ3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM43Q96BQ3 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM43Q96BQ3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.93■□□□□ 0.46
TRIM43Q96BQ3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM43Q96BQ3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM43Q96BQ3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM43Q96BQ3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM43Q96BQ3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM43Q96BQ3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM43Q96BQ3 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM43Q96BQ3 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM43Q96BQ3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.93■□□□□ 0.46
TRIM43Q96BQ3 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.93■□□□□ 0.46
TRIM43Q96BQ3 AC092337.1-201ENST00000568699 1129 ntBASIC17.93■□□□□ 0.46
TRIM43Q96BQ3 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM43Q96BQ3 AC061975.2-201ENST00000581722 295 ntBASIC17.93■□□□□ 0.46
TRIM43Q96BQ3 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM43Q96BQ3 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TRIM43Q96BQ3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM43Q96BQ3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM43Q96BQ3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM43Q96BQ3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.93■□□□□ 0.46
TRIM43Q96BQ3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TRIM43Q96BQ3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TRIM43Q96BQ3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.93■□□□□ 0.46
TRIM43Q96BQ3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM43Q96BQ3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM43Q96BQ3 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.93■□□□□ 0.46
TRIM43Q96BQ3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TRIM43Q96BQ3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.93■□□□□ 0.46
TRIM43Q96BQ3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.93■□□□□ 0.46
TRIM43Q96BQ3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRIM43Q96BQ3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM43Q96BQ3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TRIM43Q96BQ3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM43Q96BQ3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM43Q96BQ3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM43Q96BQ3 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM43Q96BQ3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM43Q96BQ3 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM43Q96BQ3 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
TRIM43Q96BQ3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.92■□□□□ 0.46
TRIM43Q96BQ3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
TRIM43Q96BQ3 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.92■□□□□ 0.46
TRIM43Q96BQ3 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.92■□□□□ 0.46
TRIM43Q96BQ3 CTBP2P5-201ENST00000454986 1264 ntBASIC17.92■□□□□ 0.46
TRIM43Q96BQ3 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM43Q96BQ3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM43Q96BQ3 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM43Q96BQ3 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
TRIM43Q96BQ3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM43Q96BQ3 RRP7BP-205ENST00000566851 833 ntBASIC17.92■□□□□ 0.46
TRIM43Q96BQ3 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.92■□□□□ 0.46
TRIM43Q96BQ3 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.92■□□□□ 0.46
TRIM43Q96BQ3 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.92■□□□□ 0.46
TRIM43Q96BQ3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
TRIM43Q96BQ3 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.92■□□□□ 0.46
TRIM43Q96BQ3 MIR6069-201ENST00000620069 79 ntBASIC17.92■□□□□ 0.46
TRIM43Q96BQ3 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.92■□□□□ 0.46
TRIM43Q96BQ3 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM43Q96BQ3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
TRIM43Q96BQ3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM43Q96BQ3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM43Q96BQ3 CLK3P2-201ENST00000427566 1453 ntBASIC17.92■□□□□ 0.46
TRIM43Q96BQ3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM43Q96BQ3 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRIM43Q96BQ3 PDIA3P1-201ENST00000471856 1510 ntBASIC17.92■□□□□ 0.46
TRIM43Q96BQ3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms