Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
DDX1Q92499 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
DDX1Q92499 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.8■□□□□ 0.44
DDX1Q92499 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX1Q92499 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX1Q92499 CYP2T1P-202ENST00000641596 2535 ntBASIC17.79■□□□□ 0.44
DDX1Q92499 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
DDX1Q92499 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX1Q92499 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX1Q92499 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.79■□□□□ 0.44
DDX1Q92499 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX1Q92499 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX1Q92499 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DDX1Q92499 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.79■□□□□ 0.44
DDX1Q92499 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX1Q92499 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX1Q92499 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DDX1Q92499 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
DDX1Q92499 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
DDX1Q92499 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.79■□□□□ 0.44
DDX1Q92499 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.79■□□□□ 0.44
DDX1Q92499 COX20P2-201ENST00000452636 358 ntBASIC17.79■□□□□ 0.44
DDX1Q92499 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.79■□□□□ 0.44
DDX1Q92499 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
DDX1Q92499 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.79■□□□□ 0.44
DDX1Q92499 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.79■□□□□ 0.44
DDX1Q92499 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.79■□□□□ 0.44
DDX1Q92499 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.79■□□□□ 0.44
DDX1Q92499 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX1Q92499 DOC2GP-204ENST00000639052 2548 ntBASIC17.79■□□□□ 0.44
DDX1Q92499 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DDX1Q92499 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX1Q92499 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.79■□□□□ 0.44
DDX1Q92499 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX1Q92499 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX1Q92499 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX1Q92499 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.79■□□□□ 0.44
DDX1Q92499 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX1Q92499 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.78■□□□□ 0.44
DDX1Q92499 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.78■□□□□ 0.44
DDX1Q92499 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX1Q92499 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX1Q92499 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX1Q92499 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DDX1Q92499 AC079328.2-201ENST00000561241 3354 ntBASIC17.78■□□□□ 0.44
DDX1Q92499 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX1Q92499 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX1Q92499 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX1Q92499 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
DDX1Q92499 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DDX1Q92499 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DDX1Q92499 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX1Q92499 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.78■□□□□ 0.44
DDX1Q92499 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
DDX1Q92499 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.78■□□□□ 0.44
DDX1Q92499 AC254562.1-201ENST00000417586 456 ntBASIC17.78■□□□□ 0.44
DDX1Q92499 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.78■□□□□ 0.44
DDX1Q92499 VN2R19P-201ENST00000442399 1052 ntBASIC17.78■□□□□ 0.44
DDX1Q92499 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.78■□□□□ 0.44
DDX1Q92499 HCG4B-203ENST00000450128 991 ntBASIC17.78■□□□□ 0.44
DDX1Q92499 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.78■□□□□ 0.44
DDX1Q92499 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX1Q92499 CXCL1P1-201ENST00000502804 216 ntBASIC17.78■□□□□ 0.44
DDX1Q92499 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.78■□□□□ 0.44
DDX1Q92499 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.78■□□□□ 0.44
DDX1Q92499 AC005829.1-201ENST00000570002 483 ntBASIC17.78■□□□□ 0.44
DDX1Q92499 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.78■□□□□ 0.44
DDX1Q92499 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.78■□□□□ 0.44
DDX1Q92499 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DDX1Q92499 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
DDX1Q92499 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.78■□□□□ 0.44
DDX1Q92499 AC018695.7-201ENST00000624587 2492 ntBASIC17.78■□□□□ 0.44
DDX1Q92499 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DDX1Q92499 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX1Q92499 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DDX1Q92499 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.78■□□□□ 0.44
DDX1Q92499 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX1Q92499 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX1Q92499 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.78■□□□□ 0.44
DDX1Q92499 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX1Q92499 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.78■□□□□ 0.44
DDX1Q92499 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.77■□□□□ 0.44
DDX1Q92499 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.77■□□□□ 0.44
DDX1Q92499 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDX1Q92499 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.77■□□□□ 0.44
DDX1Q92499 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
DDX1Q92499 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDX1Q92499 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.77■□□□□ 0.44
DDX1Q92499 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
DDX1Q92499 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDX1Q92499 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
DDX1Q92499 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.77■□□□□ 0.44
DDX1Q92499 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.77■□□□□ 0.44
DDX1Q92499 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
DDX1Q92499 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
DDX1Q92499 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDX1Q92499 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.77■□□□□ 0.44
DDX1Q92499 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
DDX1Q92499 MIR770-201ENST00000390219 98 ntBASIC17.77■□□□□ 0.44
DDX1Q92499 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms