Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATL1Q8WXF7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.39■□□□□ 0.21
ATL1Q8WXF7 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATL1Q8WXF7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.39■□□□□ 0.21
ATL1Q8WXF7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATL1Q8WXF7 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.39■□□□□ 0.21
ATL1Q8WXF7 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.39■□□□□ 0.21
ATL1Q8WXF7 AC131009.4-201ENST00000624048 1740 ntBASIC16.39■□□□□ 0.21
ATL1Q8WXF7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ATL1Q8WXF7 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
ATL1Q8WXF7 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.39■□□□□ 0.21
ATL1Q8WXF7 AC006538.1-201ENST00000567905 1585 ntBASIC16.38■□□□□ 0.21
ATL1Q8WXF7 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 HCG4-201ENST00000418983 998 ntBASIC16.38■□□□□ 0.21
ATL1Q8WXF7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 AC107918.2-201ENST00000530817 355 ntBASIC16.38■□□□□ 0.21
ATL1Q8WXF7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 MIR7706-201ENST00000613747 67 ntBASIC16.38■□□□□ 0.21
ATL1Q8WXF7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ATL1Q8WXF7 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 MRPL3P1-201ENST00000400109 1033 ntBASIC16.37■□□□□ 0.21
ATL1Q8WXF7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 AC108751.1-201ENST00000490852 363 ntBASIC16.37■□□□□ 0.21
ATL1Q8WXF7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 MIR4492-201ENST00000581627 80 ntBASIC16.37■□□□□ 0.21
ATL1Q8WXF7 SLC25A6P4-201ENST00000586535 553 ntBASIC16.37■□□□□ 0.21
ATL1Q8WXF7 AC004790.2-201ENST00000623588 572 ntBASIC16.37■□□□□ 0.21
ATL1Q8WXF7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.37■□□□□ 0.21
ATL1Q8WXF7 HLA-A-202ENST00000376806 1854 ntBASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms