Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CKAP2Q8WWK9 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CKAP2Q8WWK9 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.67■□□□□ 0.26
CKAP2Q8WWK9 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 AC023157.3-201ENST00000619086 2088 ntBASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 MMP23A-201ENST00000234610 1017 ntBASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 ACTG1P4-201ENST00000425123 1122 ntBASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 TSPY15P-201ENST00000457163 923 ntBASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 AL031432.5-201ENST00000641059 760 ntBASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CKAP2Q8WWK9 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 REXO1L8P-201ENST00000604378 1897 ntBASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 AL512652.2-201ENST00000625156 1716 ntBASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 NUS1P1-201ENST00000446295 882 ntBASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CKAP2Q8WWK9 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.64■□□□□ 0.26
CKAP2Q8WWK9 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
CKAP2Q8WWK9 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
CKAP2Q8WWK9 PRAL-201ENST00000624952 3286 ntBASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms