Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17■□□□□ 0.31
PTCD2Q8WV60 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17■□□□□ 0.31
PTCD2Q8WV60 OR7E47P-204ENST00000575924 449 ntBASIC17■□□□□ 0.31
PTCD2Q8WV60 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTCD2Q8WV60 AC064836.3-201ENST00000607928 673 ntBASIC17■□□□□ 0.31
PTCD2Q8WV60 FAM197Y3-203ENST00000618346 717 ntBASIC17■□□□□ 0.31
PTCD2Q8WV60 PGM5P2-202ENST00000637225 1043 ntBASIC17■□□□□ 0.31
PTCD2Q8WV60 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC17■□□□□ 0.31
PTCD2Q8WV60 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PTCD2Q8WV60 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PTCD2Q8WV60 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PTCD2Q8WV60 AC040160.2-201ENST00000623816 1675 ntBASIC17■□□□□ 0.31
PTCD2Q8WV60 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17■□□□□ 0.31
PTCD2Q8WV60 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTCD2Q8WV60 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTCD2Q8WV60 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PTCD2Q8WV60 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PTCD2Q8WV60 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTCD2Q8WV60 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTCD2Q8WV60 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTCD2Q8WV60 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTCD2Q8WV60 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTCD2Q8WV60 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.99■□□□□ 0.31
PTCD2Q8WV60 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PTCD2Q8WV60 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTCD2Q8WV60 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PTCD2Q8WV60 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTCD2Q8WV60 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTCD2Q8WV60 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PTCD2Q8WV60 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PTCD2Q8WV60 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.99■□□□□ 0.31
PTCD2Q8WV60 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PTCD2Q8WV60 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.99■□□□□ 0.31
PTCD2Q8WV60 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.99■□□□□ 0.31
PTCD2Q8WV60 AC091167.2-201ENST00000579581 588 ntBASIC16.99■□□□□ 0.31
PTCD2Q8WV60 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
PTCD2Q8WV60 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
PTCD2Q8WV60 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PTCD2Q8WV60 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTCD2Q8WV60 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PTCD2Q8WV60 AC002310.6-201ENST00000624451 1377 ntBASIC16.99■□□□□ 0.31
PTCD2Q8WV60 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTCD2Q8WV60 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTCD2Q8WV60 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTCD2Q8WV60 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTCD2Q8WV60 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTCD2Q8WV60 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PTCD2Q8WV60 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.98■□□□□ 0.31
PTCD2Q8WV60 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTCD2Q8WV60 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTCD2Q8WV60 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PTCD2Q8WV60 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
PTCD2Q8WV60 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.98■□□□□ 0.31
PTCD2Q8WV60 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.98■□□□□ 0.31
PTCD2Q8WV60 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTCD2Q8WV60 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTCD2Q8WV60 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
PTCD2Q8WV60 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PTCD2Q8WV60 IGLL3P-201ENST00000412472 434 ntBASIC16.98■□□□□ 0.31
PTCD2Q8WV60 PSAT1P2-201ENST00000426107 972 ntBASIC16.98■□□□□ 0.31
PTCD2Q8WV60 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.98■□□□□ 0.31
PTCD2Q8WV60 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
PTCD2Q8WV60 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC16.98■□□□□ 0.31
PTCD2Q8WV60 MIR4751-201ENST00000578027 74 ntBASIC16.98■□□□□ 0.31
PTCD2Q8WV60 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.98■□□□□ 0.31
PTCD2Q8WV60 REXO1L3P-201ENST00000622202 1288 ntBASIC16.98■□□□□ 0.31
PTCD2Q8WV60 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.98■□□□□ 0.31
PTCD2Q8WV60 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PTCD2Q8WV60 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
PTCD2Q8WV60 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.98■□□□□ 0.31
PTCD2Q8WV60 PI4KAP1-204ENST00000612579 1703 ntBASIC16.98■□□□□ 0.31
PTCD2Q8WV60 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PTCD2Q8WV60 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTCD2Q8WV60 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PTCD2Q8WV60 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.98■□□□□ 0.31
PTCD2Q8WV60 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.98■□□□□ 0.31
PTCD2Q8WV60 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.97■□□□□ 0.31
PTCD2Q8WV60 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTCD2Q8WV60 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PTCD2Q8WV60 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.97■□□□□ 0.31
PTCD2Q8WV60 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTCD2Q8WV60 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
PTCD2Q8WV60 AC023274.1-201ENST00000418278 595 ntBASIC16.97■□□□□ 0.31
PTCD2Q8WV60 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.97■□□□□ 0.31
PTCD2Q8WV60 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC16.97■□□□□ 0.31
PTCD2Q8WV60 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.97■□□□□ 0.31
PTCD2Q8WV60 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.97■□□□□ 0.31
PTCD2Q8WV60 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.97■□□□□ 0.31
PTCD2Q8WV60 AC018845.2-201ENST00000568326 409 ntBASIC16.97■□□□□ 0.31
PTCD2Q8WV60 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.97■□□□□ 0.31
PTCD2Q8WV60 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.97■□□□□ 0.31
PTCD2Q8WV60 MPDU1-223ENST00000582151 728 ntBASIC16.97■□□□□ 0.31
PTCD2Q8WV60 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
PTCD2Q8WV60 GGTLC5P-201ENST00000617623 998 ntBASIC16.97■□□□□ 0.31
PTCD2Q8WV60 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PTCD2Q8WV60 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PTCD2Q8WV60 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.97■□□□□ 0.31
PTCD2Q8WV60 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PTCD2Q8WV60 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PTCD2Q8WV60 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms