Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZIC4Q8N9L1 AC099522.2-201ENST00000607001 744 ntBASIC14.77□□□□□ -0.05
ZIC4Q8N9L1 AC091812.2-201ENST00000619081 385 ntBASIC14.77□□□□□ -0.05
ZIC4Q8N9L1 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
ZIC4Q8N9L1 AC092902.6-201ENST00000641783 218 ntBASIC14.77□□□□□ -0.05
ZIC4Q8N9L1 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZIC4Q8N9L1 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZIC4Q8N9L1 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZIC4Q8N9L1 GPAA1P2-202ENST00000606848 1787 ntBASIC14.77□□□□□ -0.05
ZIC4Q8N9L1 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
ZIC4Q8N9L1 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZIC4Q8N9L1 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ZIC4Q8N9L1 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZIC4Q8N9L1 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZIC4Q8N9L1 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.77□□□□□ -0.05
ZIC4Q8N9L1 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.77□□□□□ -0.05
ZIC4Q8N9L1 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
ZIC4Q8N9L1 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ZIC4Q8N9L1 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZIC4Q8N9L1 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 AC002056.1-201ENST00000395613 760 ntBASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 C20orf181-201ENST00000623918 480 ntBASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 AC099398.1-201ENST00000567919 2776 ntBASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 ALOX12P2-203ENST00000570921 1945 ntBASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.76□□□□□ -0.05
ZIC4Q8N9L1 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 FAM58CP-201ENST00000435741 640 ntBASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 AC112191.1-201ENST00000523689 701 ntBASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.75□□□□□ -0.05
ZIC4Q8N9L1 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms