Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS4Q8IUM7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS4Q8IUM7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS4Q8IUM7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS4Q8IUM7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS4Q8IUM7 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS4Q8IUM7 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS4Q8IUM7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
NPAS4Q8IUM7 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS4Q8IUM7 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.79■□□□□ 0.44
NPAS4Q8IUM7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.79■□□□□ 0.44
NPAS4Q8IUM7 HLA-J-202ENST00000469281 1241 ntBASIC17.79■□□□□ 0.44
NPAS4Q8IUM7 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.79■□□□□ 0.44
NPAS4Q8IUM7 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.79■□□□□ 0.44
NPAS4Q8IUM7 API5-211ENST00000534695 560 ntTSL 5 BASIC17.79■□□□□ 0.44
NPAS4Q8IUM7 AC135586.1-201ENST00000539323 574 ntBASIC17.79■□□□□ 0.44
NPAS4Q8IUM7 AC140912.1-201ENST00000577171 1054 ntBASIC17.79■□□□□ 0.44
NPAS4Q8IUM7 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.79■□□□□ 0.44
NPAS4Q8IUM7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
NPAS4Q8IUM7 BTBD7P1-201ENST00000447253 1453 ntBASIC17.79■□□□□ 0.44
NPAS4Q8IUM7 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.79■□□□□ 0.44
NPAS4Q8IUM7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.79■□□□□ 0.44
NPAS4Q8IUM7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
NPAS4Q8IUM7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.79■□□□□ 0.44
NPAS4Q8IUM7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS4Q8IUM7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS4Q8IUM7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS4Q8IUM7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NPAS4Q8IUM7 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
NPAS4Q8IUM7 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 AC067852.2-201ENST00000590513 2313 ntBASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 AL008721.1-201ENST00000609964 604 ntBASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPAS4Q8IUM7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.77■□□□□ 0.44
NPAS4Q8IUM7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NPAS4Q8IUM7 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
NPAS4Q8IUM7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NPAS4Q8IUM7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
NPAS4Q8IUM7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
NPAS4Q8IUM7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
NPAS4Q8IUM7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
NPAS4Q8IUM7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.77■□□□□ 0.44
NPAS4Q8IUM7 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NPAS4Q8IUM7 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NPAS4Q8IUM7 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NPAS4Q8IUM7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.77■□□□□ 0.44
NPAS4Q8IUM7 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NPAS4Q8IUM7 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.77■□□□□ 0.44
NPAS4Q8IUM7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.77■□□□□ 0.44
NPAS4Q8IUM7 RN7SL618P-201ENST00000477850 296 ntBASIC17.77■□□□□ 0.44
NPAS4Q8IUM7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.77■□□□□ 0.44
NPAS4Q8IUM7 AL359881.2-201ENST00000602973 570 ntBASIC17.77■□□□□ 0.44
NPAS4Q8IUM7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NPAS4Q8IUM7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.77■□□□□ 0.44
NPAS4Q8IUM7 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
NPAS4Q8IUM7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NPAS4Q8IUM7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NPAS4Q8IUM7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
NPAS4Q8IUM7 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NPAS4Q8IUM7 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
NPAS4Q8IUM7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
NPAS4Q8IUM7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NPAS4Q8IUM7 AC092068.3-201ENST00000587894 2016 ntBASIC17.77■□□□□ 0.43
NPAS4Q8IUM7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NPAS4Q8IUM7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NPAS4Q8IUM7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.77■□□□□ 0.43
NPAS4Q8IUM7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms