Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB43Q86YS6 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB43Q86YS6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.06■□□□□ 0.16
RAB43Q86YS6 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB43Q86YS6 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB43Q86YS6 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAB43Q86YS6 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAB43Q86YS6 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB43Q86YS6 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB43Q86YS6 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.05■□□□□ 0.16
RAB43Q86YS6 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB43Q86YS6 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB43Q86YS6 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB43Q86YS6 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB43Q86YS6 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.05■□□□□ 0.16
RAB43Q86YS6 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB43Q86YS6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAB43Q86YS6 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB43Q86YS6 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB43Q86YS6 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RAB43Q86YS6 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB43Q86YS6 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAB43Q86YS6 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB43Q86YS6 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB43Q86YS6 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.05■□□□□ 0.16
RAB43Q86YS6 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.05■□□□□ 0.16
RAB43Q86YS6 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAB43Q86YS6 METTL21AP1-201ENST00000438852 635 ntBASIC16.05■□□□□ 0.16
RAB43Q86YS6 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.05■□□□□ 0.16
RAB43Q86YS6 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.05■□□□□ 0.16
RAB43Q86YS6 AC068137.2-201ENST00000605408 478 ntBASIC16.05■□□□□ 0.16
RAB43Q86YS6 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.05■□□□□ 0.16
RAB43Q86YS6 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.05■□□□□ 0.16
RAB43Q86YS6 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
RAB43Q86YS6 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.05■□□□□ 0.16
RAB43Q86YS6 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB43Q86YS6 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB43Q86YS6 REXO1L11P-201ENST00000620964 1927 ntBASIC16.05■□□□□ 0.16
RAB43Q86YS6 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
RAB43Q86YS6 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RAB43Q86YS6 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.05■□□□□ 0.16
RAB43Q86YS6 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB43Q86YS6 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.05■□□□□ 0.16
RAB43Q86YS6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAB43Q86YS6 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RAB43Q86YS6 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RAB43Q86YS6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB43Q86YS6 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB43Q86YS6 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB43Q86YS6 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB43Q86YS6 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.04■□□□□ 0.16
RAB43Q86YS6 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB43Q86YS6 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RAB43Q86YS6 AC068418.2-201ENST00000577309 3703 ntBASIC16.04■□□□□ 0.16
RAB43Q86YS6 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB43Q86YS6 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAB43Q86YS6 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB43Q86YS6 DOC2GP-204ENST00000639052 2548 ntBASIC16.04■□□□□ 0.16
RAB43Q86YS6 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAB43Q86YS6 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB43Q86YS6 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.04■□□□□ 0.16
RAB43Q86YS6 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB43Q86YS6 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.04■□□□□ 0.16
RAB43Q86YS6 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RAB43Q86YS6 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
RAB43Q86YS6 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB43Q86YS6 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAB43Q86YS6 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB43Q86YS6 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB43Q86YS6 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB43Q86YS6 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
RAB43Q86YS6 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.04■□□□□ 0.16
RAB43Q86YS6 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.04■□□□□ 0.16
RAB43Q86YS6 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.04■□□□□ 0.16
RAB43Q86YS6 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.04■□□□□ 0.16
RAB43Q86YS6 AC027796.2-201ENST00000575326 344 ntBASIC16.04■□□□□ 0.16
RAB43Q86YS6 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.04■□□□□ 0.16
RAB43Q86YS6 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.04■□□□□ 0.16
RAB43Q86YS6 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAB43Q86YS6 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.04■□□□□ 0.16
RAB43Q86YS6 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAB43Q86YS6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
RAB43Q86YS6 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.04■□□□□ 0.16
RAB43Q86YS6 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB43Q86YS6 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RAB43Q86YS6 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB43Q86YS6 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RAB43Q86YS6 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.04■□□□□ 0.16
RAB43Q86YS6 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB43Q86YS6 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
RAB43Q86YS6 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAB43Q86YS6 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB43Q86YS6 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB43Q86YS6 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.03■□□□□ 0.16
RAB43Q86YS6 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB43Q86YS6 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
RAB43Q86YS6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.03■□□□□ 0.16
RAB43Q86YS6 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAB43Q86YS6 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.03■□□□□ 0.16
RAB43Q86YS6 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms