Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 PPP1R14BP5-201ENST00000440334 435 ntBASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 FAM207BP-201ENST00000447172 505 ntBASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 UBE2SP1-201ENST00000450587 669 ntBASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 TSPY20P-201ENST00000450910 630 ntBASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 MIR3180-4-201ENST00000582223 153 ntBASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 AL596087.1-201ENST00000400979 1969 ntBASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
KCNIP4Q6PIL6 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
KCNIP4Q6PIL6 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC13.02□□□□□ -0.32
KCNIP4Q6PIL6 TBC1D3P2-202ENST00000577902 1649 ntBASIC13.02□□□□□ -0.32
KCNIP4Q6PIL6 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
KCNIP4Q6PIL6 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
KCNIP4Q6PIL6 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
KCNIP4Q6PIL6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
KCNIP4Q6PIL6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.02□□□□□ -0.32
KCNIP4Q6PIL6 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
KCNIP4Q6PIL6 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
KCNIP4Q6PIL6 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
KCNIP4Q6PIL6 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
KCNIP4Q6PIL6 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.02□□□□□ -0.32
KCNIP4Q6PIL6 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
KCNIP4Q6PIL6 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
KCNIP4Q6PIL6 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
KCNIP4Q6PIL6 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.02□□□□□ -0.33
KCNIP4Q6PIL6 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP4Q6PIL6 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP4Q6PIL6 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP4Q6PIL6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP4Q6PIL6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP4Q6PIL6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
KCNIP4Q6PIL6 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP4Q6PIL6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
KCNIP4Q6PIL6 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP4Q6PIL6 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
KCNIP4Q6PIL6 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP4Q6PIL6 AL158047.1-201ENST00000445918 881 ntBASIC13.02□□□□□ -0.33
KCNIP4Q6PIL6 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC13.02□□□□□ -0.33
KCNIP4Q6PIL6 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC13.02□□□□□ -0.33
KCNIP4Q6PIL6 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC13.02□□□□□ -0.33
KCNIP4Q6PIL6 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
KCNIP4Q6PIL6 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
KCNIP4Q6PIL6 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
KCNIP4Q6PIL6 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC13.02□□□□□ -0.33
KCNIP4Q6PIL6 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP4Q6PIL6 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP4Q6PIL6 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.02□□□□□ -0.33
KCNIP4Q6PIL6 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP4Q6PIL6 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC13.02□□□□□ -0.33
KCNIP4Q6PIL6 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
KCNIP4Q6PIL6 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms