Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CASC4Q6P4E1 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CASC4Q6P4E1 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.13■□□□□ 0.33
CASC4Q6P4E1 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.13■□□□□ 0.33
CASC4Q6P4E1 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
CASC4Q6P4E1 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CASC4Q6P4E1 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CASC4Q6P4E1 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.13■□□□□ 0.33
CASC4Q6P4E1 TERC-201ENST00000602385 541 ntBASIC17.13■□□□□ 0.33
CASC4Q6P4E1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.13■□□□□ 0.33
CASC4Q6P4E1 AL121772.3-201ENST00000610840 674 ntBASIC17.13■□□□□ 0.33
CASC4Q6P4E1 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CASC4Q6P4E1 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CASC4Q6P4E1 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CASC4Q6P4E1 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.13■□□□□ 0.33
CASC4Q6P4E1 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CASC4Q6P4E1 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CASC4Q6P4E1 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CASC4Q6P4E1 ALOX12P2-203ENST00000570921 1945 ntBASIC17.13■□□□□ 0.33
CASC4Q6P4E1 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CASC4Q6P4E1 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.13■□□□□ 0.33
CASC4Q6P4E1 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CASC4Q6P4E1 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CASC4Q6P4E1 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.13■□□□□ 0.33
CASC4Q6P4E1 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CASC4Q6P4E1 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASC4Q6P4E1 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.12■□□□□ 0.33
CASC4Q6P4E1 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.12■□□□□ 0.33
CASC4Q6P4E1 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.12■□□□□ 0.33
CASC4Q6P4E1 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASC4Q6P4E1 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CASC4Q6P4E1 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CASC4Q6P4E1 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.12■□□□□ 0.33
CASC4Q6P4E1 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASC4Q6P4E1 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.12■□□□□ 0.33
CASC4Q6P4E1 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASC4Q6P4E1 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CASC4Q6P4E1 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CASC4Q6P4E1 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASC4Q6P4E1 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASC4Q6P4E1 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.12■□□□□ 0.33
CASC4Q6P4E1 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.12■□□□□ 0.33
CASC4Q6P4E1 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.12■□□□□ 0.33
CASC4Q6P4E1 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASC4Q6P4E1 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASC4Q6P4E1 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CASC4Q6P4E1 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CASC4Q6P4E1 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 LINC00895-201ENST00000629028 1637 ntBASIC17.11■□□□□ 0.33
CASC4Q6P4E1 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 KRT18P31-201ENST00000506277 1292 ntBASIC17.11■□□□□ 0.33
CASC4Q6P4E1 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 AC126755.1-201ENST00000525846 6405 ntBASIC17.11■□□□□ 0.33
CASC4Q6P4E1 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 LINC02199-201ENST00000506655 2702 ntBASIC17.11■□□□□ 0.33
CASC4Q6P4E1 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CASC4Q6P4E1 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.1■□□□□ 0.33
CASC4Q6P4E1 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASC4Q6P4E1 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASC4Q6P4E1 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CASC4Q6P4E1 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CASC4Q6P4E1 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CASC4Q6P4E1 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CASC4Q6P4E1 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms