Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
VARS2Q5ST30 GK-202ENST00000378941 458 ntTSL 3 BASIC17.67■□□□□ 0.42
VARS2Q5ST30 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.67■□□□□ 0.42
VARS2Q5ST30 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.67■□□□□ 0.42
VARS2Q5ST30 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.67■□□□□ 0.42
VARS2Q5ST30 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.67■□□□□ 0.42
VARS2Q5ST30 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VARS2Q5ST30 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.67■□□□□ 0.42
VARS2Q5ST30 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VARS2Q5ST30 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.67■□□□□ 0.42
VARS2Q5ST30 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.67■□□□□ 0.42
VARS2Q5ST30 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.67■□□□□ 0.42
VARS2Q5ST30 AC140878.1-201ENST00000565277 250 ntBASIC17.67■□□□□ 0.42
VARS2Q5ST30 AC103798.2-201ENST00000624292 632 ntBASIC17.67■□□□□ 0.42
VARS2Q5ST30 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.67■□□□□ 0.42
VARS2Q5ST30 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VARS2Q5ST30 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.67■□□□□ 0.42
VARS2Q5ST30 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.67■□□□□ 0.42
VARS2Q5ST30 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VARS2Q5ST30 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VARS2Q5ST30 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
VARS2Q5ST30 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
VARS2Q5ST30 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VARS2Q5ST30 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VARS2Q5ST30 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.67■□□□□ 0.42
VARS2Q5ST30 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.67■□□□□ 0.42
VARS2Q5ST30 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
VARS2Q5ST30 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.67■□□□□ 0.42
VARS2Q5ST30 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
VARS2Q5ST30 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.67■□□□□ 0.42
VARS2Q5ST30 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VARS2Q5ST30 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
VARS2Q5ST30 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VARS2Q5ST30 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.66■□□□□ 0.42
VARS2Q5ST30 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.66■□□□□ 0.42
VARS2Q5ST30 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VARS2Q5ST30 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
VARS2Q5ST30 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VARS2Q5ST30 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
VARS2Q5ST30 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VARS2Q5ST30 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VARS2Q5ST30 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VARS2Q5ST30 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VARS2Q5ST30 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VARS2Q5ST30 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.66■□□□□ 0.42
VARS2Q5ST30 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VARS2Q5ST30 AL603841.1-201ENST00000430516 664 ntBASIC17.66■□□□□ 0.42
VARS2Q5ST30 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.66■□□□□ 0.42
VARS2Q5ST30 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.66■□□□□ 0.42
VARS2Q5ST30 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
VARS2Q5ST30 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.66■□□□□ 0.42
VARS2Q5ST30 PRYP6-201ENST00000514804 343 ntBASIC17.66■□□□□ 0.42
VARS2Q5ST30 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC17.66■□□□□ 0.42
VARS2Q5ST30 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.66■□□□□ 0.42
VARS2Q5ST30 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.66■□□□□ 0.42
VARS2Q5ST30 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.66■□□□□ 0.42
VARS2Q5ST30 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
VARS2Q5ST30 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.66■□□□□ 0.42
VARS2Q5ST30 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.66■□□□□ 0.42
VARS2Q5ST30 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
VARS2Q5ST30 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
VARS2Q5ST30 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VARS2Q5ST30 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
VARS2Q5ST30 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VARS2Q5ST30 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VARS2Q5ST30 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
VARS2Q5ST30 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VARS2Q5ST30 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VARS2Q5ST30 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VARS2Q5ST30 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
VARS2Q5ST30 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
VARS2Q5ST30 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
VARS2Q5ST30 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VARS2Q5ST30 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VARS2Q5ST30 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.65■□□□□ 0.42
VARS2Q5ST30 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VARS2Q5ST30 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VARS2Q5ST30 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VARS2Q5ST30 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VARS2Q5ST30 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.65■□□□□ 0.42
VARS2Q5ST30 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VARS2Q5ST30 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VARS2Q5ST30 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.65■□□□□ 0.42
VARS2Q5ST30 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.65■□□□□ 0.42
VARS2Q5ST30 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.65■□□□□ 0.42
VARS2Q5ST30 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.65■□□□□ 0.42
VARS2Q5ST30 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.65■□□□□ 0.42
VARS2Q5ST30 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.65■□□□□ 0.42
VARS2Q5ST30 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.65■□□□□ 0.42
VARS2Q5ST30 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.65■□□□□ 0.42
VARS2Q5ST30 RNA5SP421-201ENST00000516864 134 ntBASIC17.65■□□□□ 0.42
VARS2Q5ST30 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC17.65■□□□□ 0.42
VARS2Q5ST30 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.65■□□□□ 0.42
VARS2Q5ST30 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.65■□□□□ 0.42
VARS2Q5ST30 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.65■□□□□ 0.42
VARS2Q5ST30 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.65■□□□□ 0.42
VARS2Q5ST30 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
VARS2Q5ST30 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VARS2Q5ST30 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VARS2Q5ST30 AC060834.1-201ENST00000443027 2032 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms