Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.32□□□□□ -0.12
LRRK2Q5S007 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRRK2Q5S007 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC14.32□□□□□ -0.12
LRRK2Q5S007 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
LRRK2Q5S007 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LRRK2Q5S007 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.32□□□□□ -0.12
LRRK2Q5S007 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRRK2Q5S007 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.31□□□□□ -0.12
LRRK2Q5S007 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRK2Q5S007 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRRK2Q5S007 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRK2Q5S007 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRK2Q5S007 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRK2Q5S007 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRK2Q5S007 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRK2Q5S007 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
LRRK2Q5S007 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.31□□□□□ -0.12
LRRK2Q5S007 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.31□□□□□ -0.12
LRRK2Q5S007 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRRK2Q5S007 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRK2Q5S007 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.31□□□□□ -0.12
LRRK2Q5S007 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.31□□□□□ -0.12
LRRK2Q5S007 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.31□□□□□ -0.12
LRRK2Q5S007 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRRK2Q5S007 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.31□□□□□ -0.12
LRRK2Q5S007 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.31□□□□□ -0.12
LRRK2Q5S007 TSACC-208ENST00000481479 741 ntTSL 2 BASIC14.31□□□□□ -0.12
LRRK2Q5S007 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.31□□□□□ -0.12
LRRK2Q5S007 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.31□□□□□ -0.12
LRRK2Q5S007 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRK2Q5S007 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.31□□□□□ -0.12
LRRK2Q5S007 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LRRK2Q5S007 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRK2Q5S007 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LRRK2Q5S007 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC14.31□□□□□ -0.12
LRRK2Q5S007 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LRRK2Q5S007 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRRK2Q5S007 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.31□□□□□ -0.12
LRRK2Q5S007 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC14.31□□□□□ -0.12
LRRK2Q5S007 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.31□□□□□ -0.12
LRRK2Q5S007 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LRRK2Q5S007 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LRRK2Q5S007 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
LRRK2Q5S007 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.3□□□□□ -0.12
LRRK2Q5S007 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.3□□□□□ -0.12
LRRK2Q5S007 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.3□□□□□ -0.12
LRRK2Q5S007 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRK2Q5S007 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.3□□□□□ -0.12
LRRK2Q5S007 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
LRRK2Q5S007 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.3□□□□□ -0.12
LRRK2Q5S007 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LRRK2Q5S007 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRK2Q5S007 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRK2Q5S007 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LRRK2Q5S007 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRRK2Q5S007 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LRRK2Q5S007 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRRK2Q5S007 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LRRK2Q5S007 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRK2Q5S007 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRK2Q5S007 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRK2Q5S007 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRRK2Q5S007 EIF4HP1-201ENST00000453115 687 ntBASIC14.3□□□□□ -0.12
LRRK2Q5S007 AKR7A2P1-201ENST00000460134 915 ntBASIC14.3□□□□□ -0.12
LRRK2Q5S007 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.3□□□□□ -0.12
LRRK2Q5S007 AC026979.3-201ENST00000607315 403 ntBASIC14.3□□□□□ -0.12
LRRK2Q5S007 AC005695.3-201ENST00000614522 232 ntBASIC14.3□□□□□ -0.12
LRRK2Q5S007 AC128714.1-201ENST00000637035 887 ntBASIC14.3□□□□□ -0.12
LRRK2Q5S007 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRRK2Q5S007 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.3□□□□□ -0.12
LRRK2Q5S007 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC14.3□□□□□ -0.12
LRRK2Q5S007 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRK2Q5S007 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.3□□□□□ -0.12
LRRK2Q5S007 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
LRRK2Q5S007 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.3□□□□□ -0.12
LRRK2Q5S007 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRK2Q5S007 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRK2Q5S007 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRK2Q5S007 LINC00304-203ENST00000565008 1864 ntBASIC14.3□□□□□ -0.12
LRRK2Q5S007 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRK2Q5S007 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRRK2Q5S007 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
LRRK2Q5S007 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LRRK2Q5S007 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LRRK2Q5S007 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.3□□□□□ -0.12
LRRK2Q5S007 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.3□□□□□ -0.12
LRRK2Q5S007 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC14.3□□□□□ -0.12
LRRK2Q5S007 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.3□□□□□ -0.12
LRRK2Q5S007 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.3□□□□□ -0.12
LRRK2Q5S007 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRK2Q5S007 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.29□□□□□ -0.12
LRRK2Q5S007 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRRK2Q5S007 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.29□□□□□ -0.12
LRRK2Q5S007 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LRRK2Q5S007 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRK2Q5S007 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LRRK2Q5S007 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.29□□□□□ -0.12
LRRK2Q5S007 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC14.29□□□□□ -0.12
LRRK2Q5S007 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.29□□□□□ -0.12
LRRK2Q5S007 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms