Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGCS1Q01581 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGCS1Q01581 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.17■□□□□ 0.18
HMGCS1Q01581 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.17■□□□□ 0.18
HMGCS1Q01581 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HMGCS1Q01581 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.17■□□□□ 0.18
HMGCS1Q01581 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.17■□□□□ 0.18
HMGCS1Q01581 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.17■□□□□ 0.18
HMGCS1Q01581 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HMGCS1Q01581 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGCS1Q01581 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGCS1Q01581 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HMGCS1Q01581 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCS1Q01581 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
HMGCS1Q01581 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCS1Q01581 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCS1Q01581 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
HMGCS1Q01581 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCS1Q01581 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HMGCS1Q01581 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCS1Q01581 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCS1Q01581 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCS1Q01581 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.16■□□□□ 0.18
HMGCS1Q01581 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCS1Q01581 CICP6-201ENST00000457191 2729 ntBASIC16.16■□□□□ 0.18
HMGCS1Q01581 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCS1Q01581 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCS1Q01581 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCS1Q01581 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HMGCS1Q01581 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCS1Q01581 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCS1Q01581 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.16■□□□□ 0.18
HMGCS1Q01581 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.16■□□□□ 0.18
HMGCS1Q01581 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.16■□□□□ 0.18
HMGCS1Q01581 UNC93B7-201ENST00000509439 705 ntBASIC16.16■□□□□ 0.18
HMGCS1Q01581 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.16■□□□□ 0.18
HMGCS1Q01581 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCS1Q01581 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.16■□□□□ 0.18
HMGCS1Q01581 MPDU1-223ENST00000582151 728 ntBASIC16.16■□□□□ 0.18
HMGCS1Q01581 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.16■□□□□ 0.18
HMGCS1Q01581 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.16■□□□□ 0.18
HMGCS1Q01581 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.16■□□□□ 0.18
HMGCS1Q01581 IFNL4P1-201ENST00000607083 540 ntBASIC16.16■□□□□ 0.18
HMGCS1Q01581 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HMGCS1Q01581 REXO1L3P-201ENST00000622202 1288 ntBASIC16.16■□□□□ 0.18
HMGCS1Q01581 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.16■□□□□ 0.18
HMGCS1Q01581 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
HMGCS1Q01581 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HMGCS1Q01581 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.16■□□□□ 0.18
HMGCS1Q01581 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCS1Q01581 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.16■□□□□ 0.18
HMGCS1Q01581 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCS1Q01581 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCS1Q01581 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCS1Q01581 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HMGCS1Q01581 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCS1Q01581 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCS1Q01581 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCS1Q01581 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCS1Q01581 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCS1Q01581 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.16■□□□□ 0.18
HMGCS1Q01581 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.16■□□□□ 0.18
HMGCS1Q01581 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HMGCS1Q01581 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCS1Q01581 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCS1Q01581 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HMGCS1Q01581 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.16■□□□□ 0.18
HMGCS1Q01581 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGCS1Q01581 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HMGCS1Q01581 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HMGCS1Q01581 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.15■□□□□ 0.18
HMGCS1Q01581 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HMGCS1Q01581 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
HMGCS1Q01581 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.15■□□□□ 0.18
HMGCS1Q01581 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HMGCS1Q01581 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
HMGCS1Q01581 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.15■□□□□ 0.18
HMGCS1Q01581 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGCS1Q01581 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGCS1Q01581 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HMGCS1Q01581 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HMGCS1Q01581 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.15■□□□□ 0.18
HMGCS1Q01581 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.15■□□□□ 0.18
HMGCS1Q01581 SLC25A6P2-201ENST00000497974 877 ntBASIC16.15■□□□□ 0.18
HMGCS1Q01581 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HMGCS1Q01581 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGCS1Q01581 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HMGCS1Q01581 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.15■□□□□ 0.18
HMGCS1Q01581 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.15■□□□□ 0.18
HMGCS1Q01581 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HMGCS1Q01581 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
HMGCS1Q01581 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.15■□□□□ 0.18
HMGCS1Q01581 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.15■□□□□ 0.18
HMGCS1Q01581 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.15■□□□□ 0.18
HMGCS1Q01581 AL139011.1-202ENST00000642063 584 ntBASIC16.15■□□□□ 0.18
HMGCS1Q01581 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.15■□□□□ 0.18
HMGCS1Q01581 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HMGCS1Q01581 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGCS1Q01581 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGCS1Q01581 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms