Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.97□□□□□ -0.01
H3F3AP84243 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
H3F3AP84243 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.97□□□□□ -0.01
H3F3AP84243 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
H3F3AP84243 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.97□□□□□ -0.01
H3F3AP84243 PDPK2P-202ENST00000562415 1191 ntBASIC14.97□□□□□ -0.01
H3F3AP84243 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.97□□□□□ -0.01
H3F3AP84243 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.97□□□□□ -0.01
H3F3AP84243 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.97□□□□□ -0.01
H3F3AP84243 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H3F3AP84243 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
H3F3AP84243 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
H3F3AP84243 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.97□□□□□ -0.01
H3F3AP84243 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
H3F3AP84243 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H3F3AP84243 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
H3F3AP84243 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H3F3AP84243 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.97□□□□□ -0.01
H3F3AP84243 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
H3F3AP84243 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H3F3AP84243 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H3F3AP84243 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H3F3AP84243 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.97□□□□□ -0.01
H3F3AP84243 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
H3F3AP84243 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
H3F3AP84243 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
H3F3AP84243 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.96□□□□□ -0.01
H3F3AP84243 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
H3F3AP84243 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.96□□□□□ -0.01
H3F3AP84243 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
H3F3AP84243 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
H3F3AP84243 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
H3F3AP84243 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
H3F3AP84243 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
H3F3AP84243 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
H3F3AP84243 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
H3F3AP84243 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.96□□□□□ -0.01
H3F3AP84243 RNU1-129P-201ENST00000384064 167 ntBASIC14.96□□□□□ -0.01
H3F3AP84243 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.96□□□□□ -0.01
H3F3AP84243 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.96□□□□□ -0.01
H3F3AP84243 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.96□□□□□ -0.01
H3F3AP84243 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.96□□□□□ -0.01
H3F3AP84243 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
H3F3AP84243 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.96□□□□□ -0.01
H3F3AP84243 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.96□□□□□ -0.01
H3F3AP84243 AC040169.1-201ENST00000565382 521 ntBASIC14.96□□□□□ -0.01
H3F3AP84243 U1.21-201ENST00000580816 167 ntBASIC14.96□□□□□ -0.01
H3F3AP84243 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.96□□□□□ -0.01
H3F3AP84243 AL512652.2-201ENST00000625156 1716 ntBASIC14.96□□□□□ -0.01
H3F3AP84243 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.96□□□□□ -0.01
H3F3AP84243 AC092865.6-201ENST00000642101 219 ntBASIC14.96□□□□□ -0.01
H3F3AP84243 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
H3F3AP84243 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
H3F3AP84243 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
H3F3AP84243 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.96□□□□□ -0.01
H3F3AP84243 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
H3F3AP84243 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
H3F3AP84243 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.96□□□□□ -0.02
H3F3AP84243 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.96□□□□□ -0.02
H3F3AP84243 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.96□□□□□ -0.02
H3F3AP84243 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
H3F3AP84243 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.96□□□□□ -0.02
H3F3AP84243 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
H3F3AP84243 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
H3F3AP84243 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.96□□□□□ -0.02
H3F3AP84243 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
H3F3AP84243 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.02
H3F3AP84243 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
H3F3AP84243 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
H3F3AP84243 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H3F3AP84243 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H3F3AP84243 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H3F3AP84243 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H3F3AP84243 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.95□□□□□ -0.02
H3F3AP84243 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
H3F3AP84243 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H3F3AP84243 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
H3F3AP84243 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.95□□□□□ -0.02
H3F3AP84243 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
H3F3AP84243 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
H3F3AP84243 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
H3F3AP84243 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
H3F3AP84243 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H3F3AP84243 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H3F3AP84243 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
H3F3AP84243 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.95□□□□□ -0.02
H3F3AP84243 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
H3F3AP84243 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
H3F3AP84243 PMS2P4-201ENST00000412466 1052 ntBASIC14.95□□□□□ -0.02
H3F3AP84243 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.95□□□□□ -0.02
H3F3AP84243 AC140658.5-201ENST00000438532 169 ntBASIC14.95□□□□□ -0.02
H3F3AP84243 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
H3F3AP84243 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
H3F3AP84243 AC074386.1-202ENST00000463561 864 ntBASIC14.95□□□□□ -0.02
H3F3AP84243 POLD2P1-201ENST00000511220 997 ntBASIC14.95□□□□□ -0.02
H3F3AP84243 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.95□□□□□ -0.02
H3F3AP84243 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.95□□□□□ -0.02
H3F3AP84243 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.95□□□□□ -0.02
H3F3AP84243 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
H3F3AP84243 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms