Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
YBX1P67809 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
YBX1P67809 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.32■□□□□ 0.2
YBX1P67809 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.32■□□□□ 0.2
YBX1P67809 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
YBX1P67809 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
YBX1P67809 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
YBX1P67809 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
YBX1P67809 SLC22A20-204ENST00000530038 1673 ntBASIC16.32■□□□□ 0.2
YBX1P67809 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.32■□□□□ 0.2
YBX1P67809 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.32■□□□□ 0.2
YBX1P67809 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
YBX1P67809 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.32■□□□□ 0.2
YBX1P67809 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.32■□□□□ 0.2
YBX1P67809 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.32■□□□□ 0.2
YBX1P67809 AC010507.1-201ENST00000633895 436 ntBASIC16.32■□□□□ 0.2
YBX1P67809 CYP2T1P-202ENST00000641596 2535 ntBASIC16.32■□□□□ 0.2
YBX1P67809 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
YBX1P67809 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
YBX1P67809 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
YBX1P67809 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.32■□□□□ 0.2
YBX1P67809 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.31■□□□□ 0.2
YBX1P67809 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.31■□□□□ 0.2
YBX1P67809 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
YBX1P67809 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
YBX1P67809 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.31■□□□□ 0.2
YBX1P67809 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
YBX1P67809 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
YBX1P67809 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
YBX1P67809 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
YBX1P67809 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
YBX1P67809 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
YBX1P67809 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.31■□□□□ 0.2
YBX1P67809 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
YBX1P67809 PMS2P1-201ENST00000431037 1228 ntBASIC16.31■□□□□ 0.2
YBX1P67809 FAM185BP-201ENST00000443595 716 ntBASIC16.31■□□□□ 0.2
YBX1P67809 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
YBX1P67809 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.31■□□□□ 0.2
YBX1P67809 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.31■□□□□ 0.2
YBX1P67809 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.31■□□□□ 0.2
YBX1P67809 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
YBX1P67809 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.31■□□□□ 0.2
YBX1P67809 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
YBX1P67809 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.31■□□□□ 0.2
YBX1P67809 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
YBX1P67809 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
YBX1P67809 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
YBX1P67809 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
YBX1P67809 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.3■□□□□ 0.2
YBX1P67809 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
YBX1P67809 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.3■□□□□ 0.2
YBX1P67809 AC005052.1-201ENST00000625181 2492 ntBASIC16.3■□□□□ 0.2
YBX1P67809 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
YBX1P67809 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
YBX1P67809 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
YBX1P67809 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
YBX1P67809 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
YBX1P67809 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
YBX1P67809 AL596257.1-201ENST00000641463 2694 ntBASIC16.3■□□□□ 0.2
YBX1P67809 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.3■□□□□ 0.2
YBX1P67809 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
YBX1P67809 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
YBX1P67809 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
YBX1P67809 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
YBX1P67809 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.3■□□□□ 0.2
YBX1P67809 MED15P5-201ENST00000423150 992 ntBASIC16.3■□□□□ 0.2
YBX1P67809 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.3■□□□□ 0.2
YBX1P67809 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.3■□□□□ 0.2
YBX1P67809 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.3■□□□□ 0.2
YBX1P67809 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.3■□□□□ 0.2
YBX1P67809 KRT18P3-201ENST00000451602 1288 ntBASIC16.3■□□□□ 0.2
YBX1P67809 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.3■□□□□ 0.2
YBX1P67809 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.3■□□□□ 0.2
YBX1P67809 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
YBX1P67809 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.3■□□□□ 0.2
YBX1P67809 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.3■□□□□ 0.2
YBX1P67809 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
YBX1P67809 AC027601.4-201ENST00000611259 610 ntBASIC16.3■□□□□ 0.2
YBX1P67809 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
YBX1P67809 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.3■□□□□ 0.2
YBX1P67809 AC092865.6-201ENST00000642101 219 ntBASIC16.3■□□□□ 0.2
YBX1P67809 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
YBX1P67809 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
YBX1P67809 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
YBX1P67809 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
YBX1P67809 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
YBX1P67809 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
YBX1P67809 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.3■□□□□ 0.2
YBX1P67809 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
YBX1P67809 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
YBX1P67809 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
YBX1P67809 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
YBX1P67809 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
YBX1P67809 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.3■□□□□ 0.2
YBX1P67809 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
YBX1P67809 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
YBX1P67809 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
YBX1P67809 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YBX1P67809 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YBX1P67809 KRT8P49-201ENST00000604166 1432 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms