Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.02■□□□□ 0.16
CLDN6P56747 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN6P56747 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN6P56747 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN6P56747 GNAQP1-201ENST00000444815 1067 ntBASIC16.02■□□□□ 0.16
CLDN6P56747 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.02■□□□□ 0.16
CLDN6P56747 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN6P56747 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.02■□□□□ 0.16
CLDN6P56747 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.02■□□□□ 0.16
CLDN6P56747 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.02■□□□□ 0.16
CLDN6P56747 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN6P56747 LINC00896-202ENST00000609602 2128 ntBASIC16.02■□□□□ 0.16
CLDN6P56747 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN6P56747 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CLDN6P56747 MIR6752-201ENST00000618442 71 ntBASIC16.02■□□□□ 0.16
CLDN6P56747 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN6P56747 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN6P56747 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN6P56747 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.02■□□□□ 0.15
CLDN6P56747 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CLDN6P56747 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN6P56747 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN6P56747 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN6P56747 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.02■□□□□ 0.15
CLDN6P56747 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.02■□□□□ 0.15
CLDN6P56747 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CLDN6P56747 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.02■□□□□ 0.15
CLDN6P56747 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN6P56747 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN6P56747 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN6P56747 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN6P56747 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN6P56747 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN6P56747 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CLDN6P56747 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN6P56747 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.01■□□□□ 0.15
CLDN6P56747 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.01■□□□□ 0.15
CLDN6P56747 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN6P56747 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CLDN6P56747 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN6P56747 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CLDN6P56747 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN6P56747 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
CLDN6P56747 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.01■□□□□ 0.15
CLDN6P56747 FOXO1B-201ENST00000504678 1527 ntBASIC16.01■□□□□ 0.15
CLDN6P56747 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.01■□□□□ 0.15
CLDN6P56747 MTND6P24-201ENST00000440466 518 ntBASIC16.01■□□□□ 0.15
CLDN6P56747 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN6P56747 AC022494.1-201ENST00000466044 728 ntBASIC16.01■□□□□ 0.15
CLDN6P56747 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.01■□□□□ 0.15
CLDN6P56747 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN6P56747 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.01■□□□□ 0.15
CLDN6P56747 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN6P56747 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.01■□□□□ 0.15
CLDN6P56747 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN6P56747 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN6P56747 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN6P56747 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN6P56747 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN6P56747 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN6P56747 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN6P56747 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN6P56747 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN6P56747 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16■□□□□ 0.15
CLDN6P56747 TOP3BP1-201ENST00000420768 1380 ntBASIC16■□□□□ 0.15
CLDN6P56747 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CLDN6P56747 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDN6P56747 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN6P56747 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN6P56747 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16■□□□□ 0.15
CLDN6P56747 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CLDN6P56747 AC131009.4-201ENST00000624048 1740 ntBASIC16■□□□□ 0.15
CLDN6P56747 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN6P56747 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN6P56747 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN6P56747 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDN6P56747 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16■□□□□ 0.15
CLDN6P56747 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDN6P56747 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
CLDN6P56747 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16■□□□□ 0.15
CLDN6P56747 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN6P56747 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16■□□□□ 0.15
CLDN6P56747 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16■□□□□ 0.15
CLDN6P56747 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16■□□□□ 0.15
CLDN6P56747 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDN6P56747 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16■□□□□ 0.15
CLDN6P56747 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16■□□□□ 0.15
CLDN6P56747 AC004840.1-201ENST00000636359 365 ntBASIC16■□□□□ 0.15
CLDN6P56747 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16■□□□□ 0.15
CLDN6P56747 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDN6P56747 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CLDN6P56747 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CLDN6P56747 AC020916.1-201ENST00000587762 1774 ntBASIC16■□□□□ 0.15
CLDN6P56747 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN6P56747 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16■□□□□ 0.15
CLDN6P56747 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CLDN6P56747 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CLDN6P56747 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.99■□□□□ 0.15
CLDN6P56747 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
CLDN6P56747 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms