Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATN1P54259 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ATN1P54259 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.35■□□□□ 0.53
ATN1P54259 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATN1P54259 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATN1P54259 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.34■□□□□ 0.53
ATN1P54259 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.34■□□□□ 0.53
ATN1P54259 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATN1P54259 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.34■□□□□ 0.53
ATN1P54259 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATN1P54259 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATN1P54259 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.34■□□□□ 0.53
ATN1P54259 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.34■□□□□ 0.53
ATN1P54259 FAM86MP-201ENST00000340703 885 ntBASIC18.34■□□□□ 0.53
ATN1P54259 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.34■□□□□ 0.53
ATN1P54259 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.34■□□□□ 0.53
ATN1P54259 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.34■□□□□ 0.53
ATN1P54259 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATN1P54259 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATN1P54259 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATN1P54259 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATN1P54259 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC18.34■□□□□ 0.53
ATN1P54259 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATN1P54259 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATN1P54259 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATN1P54259 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.34■□□□□ 0.53
ATN1P54259 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
ATN1P54259 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATN1P54259 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATN1P54259 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.34■□□□□ 0.53
ATN1P54259 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATN1P54259 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATN1P54259 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATN1P54259 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATN1P54259 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATN1P54259 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATN1P54259 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.34■□□□□ 0.53
ATN1P54259 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.34■□□□□ 0.53
ATN1P54259 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.34■□□□□ 0.53
ATN1P54259 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
ATN1P54259 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
ATN1P54259 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
ATN1P54259 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATN1P54259 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
ATN1P54259 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.33■□□□□ 0.53
ATN1P54259 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATN1P54259 KRT8P49-201ENST00000604166 1432 ntBASIC18.33■□□□□ 0.53
ATN1P54259 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATN1P54259 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.33■□□□□ 0.53
ATN1P54259 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.33■□□□□ 0.53
ATN1P54259 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATN1P54259 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATN1P54259 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATN1P54259 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATN1P54259 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATN1P54259 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.33■□□□□ 0.52
ATN1P54259 MYCLP2-201ENST00000449268 967 ntBASIC18.33■□□□□ 0.52
ATN1P54259 TTTY14-204ENST00000452584 860 ntTSL 3 BASIC18.33■□□□□ 0.52
ATN1P54259 AC119751.2-201ENST00000504529 210 ntBASIC18.33■□□□□ 0.52
ATN1P54259 PACS1-203ENST00000524815 628 ntTSL 4 BASIC18.33■□□□□ 0.52
ATN1P54259 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC18.33■□□□□ 0.52
ATN1P54259 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.33■□□□□ 0.52
ATN1P54259 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.33■□□□□ 0.52
ATN1P54259 MIR4492-201ENST00000581627 80 ntBASIC18.33■□□□□ 0.52
ATN1P54259 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ATN1P54259 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.33■□□□□ 0.52
ATN1P54259 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.33■□□□□ 0.52
ATN1P54259 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
ATN1P54259 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ATN1P54259 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATN1P54259 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.32■□□□□ 0.52
ATN1P54259 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ATN1P54259 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.32■□□□□ 0.52
ATN1P54259 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
ATN1P54259 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
ATN1P54259 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATN1P54259 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.32■□□□□ 0.52
ATN1P54259 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATN1P54259 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATN1P54259 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATN1P54259 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATN1P54259 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATN1P54259 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ATN1P54259 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.32■□□□□ 0.52
ATN1P54259 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.32■□□□□ 0.52
ATN1P54259 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATN1P54259 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATN1P54259 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATN1P54259 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.32■□□□□ 0.52
ATN1P54259 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.32■□□□□ 0.52
ATN1P54259 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.32■□□□□ 0.52
ATN1P54259 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.32■□□□□ 0.52
ATN1P54259 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.32■□□□□ 0.52
ATN1P54259 SLC25A6P5-201ENST00000435663 894 ntBASIC18.32■□□□□ 0.52
ATN1P54259 AC234783.1-201ENST00000441761 496 ntBASIC18.32■□□□□ 0.52
ATN1P54259 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ATN1P54259 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.32■□□□□ 0.52
ATN1P54259 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.32■□□□□ 0.52
ATN1P54259 FAM8A2P-201ENST00000528813 1142 ntBASIC18.32■□□□□ 0.52
ATN1P54259 ZNF890P-202ENST00000530367 1156 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms