Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMSP52788 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.75■□□□□ 0.11
SMSP52788 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMSP52788 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMSP52788 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMSP52788 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMSP52788 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMSP52788 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SMSP52788 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.75■□□□□ 0.11
SMSP52788 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
SMSP52788 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMSP52788 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
SMSP52788 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
SMSP52788 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SMSP52788 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.75■□□□□ 0.11
SMSP52788 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMSP52788 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMSP52788 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMSP52788 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SMSP52788 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SMSP52788 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SMSP52788 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMSP52788 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMSP52788 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMSP52788 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMSP52788 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMSP52788 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SMSP52788 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMSP52788 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMSP52788 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.74■□□□□ 0.11
SMSP52788 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMSP52788 RNF216P1-203ENST00000404404 2427 ntBASIC15.74■□□□□ 0.11
SMSP52788 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMSP52788 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMSP52788 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMSP52788 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
SMSP52788 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMSP52788 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMSP52788 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.74■□□□□ 0.11
SMSP52788 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMSP52788 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMSP52788 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMSP52788 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMSP52788 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
SMSP52788 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.74■□□□□ 0.11
SMSP52788 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
SMSP52788 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMSP52788 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.74■□□□□ 0.11
SMSP52788 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.74■□□□□ 0.11
SMSP52788 AC023274.1-201ENST00000418278 595 ntBASIC15.74■□□□□ 0.11
SMSP52788 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.74■□□□□ 0.11
SMSP52788 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.74■□□□□ 0.11
SMSP52788 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMSP52788 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.74■□□□□ 0.11
SMSP52788 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.74■□□□□ 0.11
SMSP52788 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.74■□□□□ 0.11
SMSP52788 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.74■□□□□ 0.11
SMSP52788 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.74■□□□□ 0.11
SMSP52788 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMSP52788 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMSP52788 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
SMSP52788 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMSP52788 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
SMSP52788 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.74■□□□□ 0.11
SMSP52788 AC010460.3-201ENST00000511359 1579 ntBASIC15.74■□□□□ 0.11
SMSP52788 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMSP52788 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SMSP52788 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SMSP52788 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
SMSP52788 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMSP52788 AL596257.1-201ENST00000641463 2694 ntBASIC15.73■□□□□ 0.11
SMSP52788 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.73■□□□□ 0.11
SMSP52788 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMSP52788 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMSP52788 AL162727.3-201ENST00000635661 2787 ntBASIC15.73■□□□□ 0.11
SMSP52788 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
SMSP52788 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.73■□□□□ 0.11
SMSP52788 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SMSP52788 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMSP52788 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.73■□□□□ 0.11
SMSP52788 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.73■□□□□ 0.11
SMSP52788 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.73■□□□□ 0.11
SMSP52788 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.73■□□□□ 0.11
SMSP52788 AC007967.3-201ENST00000434308 558 ntBASIC15.73■□□□□ 0.11
SMSP52788 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.73■□□□□ 0.11
SMSP52788 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.73■□□□□ 0.11
SMSP52788 AC108751.1-201ENST00000490852 363 ntBASIC15.73■□□□□ 0.11
SMSP52788 AC136632.2-201ENST00000512891 861 ntBASIC15.73■□□□□ 0.11
SMSP52788 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.73■□□□□ 0.11
SMSP52788 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.73■□□□□ 0.11
SMSP52788 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.73■□□□□ 0.11
SMSP52788 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.73■□□□□ 0.11
SMSP52788 AC064836.3-201ENST00000607928 673 ntBASIC15.73■□□□□ 0.11
SMSP52788 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.73■□□□□ 0.11
SMSP52788 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SMSP52788 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
SMSP52788 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SMSP52788 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.73■□□□□ 0.11
SMSP52788 AC092068.3-201ENST00000587894 2016 ntBASIC15.73■□□□□ 0.11
SMSP52788 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms