Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HADHAP40939 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HADHAP40939 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
HADHAP40939 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.97■□□□□ 0.31
HADHAP40939 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.97■□□□□ 0.31
HADHAP40939 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HADHAP40939 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HADHAP40939 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.97■□□□□ 0.31
HADHAP40939 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HADHAP40939 MRPL3P1-201ENST00000400109 1033 ntBASIC16.97■□□□□ 0.31
HADHAP40939 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.97■□□□□ 0.31
HADHAP40939 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
HADHAP40939 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
HADHAP40939 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.97■□□□□ 0.31
HADHAP40939 IGHV3-65-201ENST00000523210 341 ntBASIC16.97■□□□□ 0.31
HADHAP40939 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HADHAP40939 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.97■□□□□ 0.31
HADHAP40939 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HADHAP40939 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.97■□□□□ 0.31
HADHAP40939 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HADHAP40939 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HADHAP40939 TOP3BP1-201ENST00000420768 1380 ntBASIC16.97■□□□□ 0.31
HADHAP40939 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HADHAP40939 AP002414.3-201ENST00000589352 1468 ntBASIC16.97■□□□□ 0.31
HADHAP40939 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HADHAP40939 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.97■□□□□ 0.31
HADHAP40939 AL391256.1-201ENST00000443260 1855 ntBASIC16.97■□□□□ 0.31
HADHAP40939 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
HADHAP40939 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
HADHAP40939 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HADHAP40939 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HADHAP40939 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HADHAP40939 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.96■□□□□ 0.31
HADHAP40939 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HADHAP40939 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HADHAP40939 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
HADHAP40939 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HADHAP40939 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.96■□□□□ 0.31
HADHAP40939 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HADHAP40939 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.96■□□□□ 0.31
HADHAP40939 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.96■□□□□ 0.31
HADHAP40939 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.96■□□□□ 0.31
HADHAP40939 SLC25A6P4-201ENST00000586535 553 ntBASIC16.96■□□□□ 0.31
HADHAP40939 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
HADHAP40939 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HADHAP40939 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HADHAP40939 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.96■□□□□ 0.31
HADHAP40939 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.96■□□□□ 0.31
HADHAP40939 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HADHAP40939 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HADHAP40939 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HADHAP40939 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HADHAP40939 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HADHAP40939 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
HADHAP40939 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
HADHAP40939 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HADHAP40939 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
HADHAP40939 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HADHAP40939 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.95■□□□□ 0.3
HADHAP40939 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HADHAP40939 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
HADHAP40939 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.95■□□□□ 0.3
HADHAP40939 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HADHAP40939 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HADHAP40939 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.95■□□□□ 0.3
HADHAP40939 AC002310.6-201ENST00000624451 1377 ntBASIC16.95■□□□□ 0.3
HADHAP40939 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HADHAP40939 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.95■□□□□ 0.3
HADHAP40939 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HADHAP40939 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HADHAP40939 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.95■□□□□ 0.3
HADHAP40939 AC092910.1-201ENST00000482027 1129 ntBASIC16.95■□□□□ 0.3
HADHAP40939 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.95■□□□□ 0.3
HADHAP40939 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.95■□□□□ 0.3
HADHAP40939 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HADHAP40939 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.95■□□□□ 0.3
HADHAP40939 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.95■□□□□ 0.3
HADHAP40939 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.95■□□□□ 0.3
HADHAP40939 MIR7706-201ENST00000613747 67 ntBASIC16.95■□□□□ 0.3
HADHAP40939 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
HADHAP40939 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.95■□□□□ 0.3
HADHAP40939 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
HADHAP40939 AC018695.7-201ENST00000624587 2492 ntBASIC16.95■□□□□ 0.3
HADHAP40939 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HADHAP40939 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.95■□□□□ 0.3
HADHAP40939 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HADHAP40939 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HADHAP40939 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HADHAP40939 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HADHAP40939 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HADHAP40939 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HADHAP40939 AC092171.3-201ENST00000610122 2651 ntBASIC16.94■□□□□ 0.3
HADHAP40939 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HADHAP40939 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HADHAP40939 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HADHAP40939 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HADHAP40939 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HADHAP40939 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HADHAP40939 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HADHAP40939 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms